Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01377 ATGGCACCCTCGTCAAGTCTTGTTCCTACGCTTCTTTTAGGTTTAGTTTTAGTCGTTGGAGTTATTGTCCCTAGAAGTGAGGCCAGACCAAGAGCATTCTTTGTATTCGGAGATTCTCTAGTTGACAATGGAAACAACAACTATTTGCAAACAGTTGCTCGTGCTAATGCCCCTCCTTATGGAATTGACTACCCAACTCACAGAGCAACTGGACGCTTCTCTAATGGTTTCAACATTCCTGATTTTATCAGTCAAGAACTTGGTGCTGAGTCTACAATGCCATACTTGAGCCCAGACTTAACAAGAGAGAATCTCTTAGTTGGTGCAAATTTTGCTTCAGCTGGAGTTGGAATCCTTAACGATACAGGAGATCACTTTATGAACATAATTAAAATGCATAAACAATTAGAGAATTTTAAAGAGTACCAACAACGAATGAGTGCTCTAATTGGTGTCTCACGAACCAAAAGACTGGTGAATCAAGCCTTAATTCTCATCACTGTTGGTGGGAATGACTTTGTAAACAATTACTTTCTGGTGGATTCTACTGCAAGGTCTCGCCAATATCCACTCCCAGACTACGTCAACCTTCTCATCTCTCGCTACAGAAAGCACTTACAGAAGCTGTACGATCTGGGAGCTCGACGAGTTATTGTAACAGGGACAGGACCAATGGGTTGTGCTCCTGCAGAATTGGCTATGCGAGGCAAAAATGGAGAATGTTCTGCTGAGTTACAGCGTGCTGCAGCATTGTACAACCCTCAGTTAGAGCAGATGATAGTTGAACTCAACAACAAAATTGGCTCTGTCATTTTCATTGCTGCAAATACAGCACAGATGCACAATGACTTCATCACCAATCCCAAAGCTTATGGATTTAACACGTCAAAAGTAGCTTGTTGTGGACAAGGACCCTACAATGGAATGGGGCTATGCTTACCAGTCTCCAACCTTTGCCCCAACAGAGAACTGCATGCATTTTGGGATCCATTCCATCCAACTGAAAAGGCAAACAAACTTGTTGTACAACAAATTATGTCAGGTTCCACCAAGTATATGAAGCCTATCAACCTCAGCACCATTCTGGCCATCGATGCTCCACTACATTCATGA 1113 0.4259 MAPSSSLVPTLLLGLVLVVGVIVPRSEARPRAFFVFGDSLVDNGNNNYLQTVARANAPPYGIDYPTHRATGRFSNGFNIPDFISQELGAESTMPYLSPDLTRENLLVGANFASAGVGILNDTGDHFMNIIKMHKQLENFKEYQQRMSALIGVSRTKRLVNQALILITVGGNDFVNNYFLVDSTARSRQYPLPDYVNLLISRYRKHLQKLYDLGARRVIVTGTGPMGCAPAELAMRGKNGECSAELQRAAALYNPQLEQMIVELNNKIGSVIFIAANTAQMHNDFITNPKAYGFNTSKVACCGQGPYNGMGLCLPVSNLCPNRELHAFWDPFHPTEKANKLVVQQIMSGSTKYMKPINLSTILAIDAPLHS* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01377 370 Pfam GDSL-like Lipase/Acylhydrolase 34 345 IPR001087 GO:0016788
Lapu1g01377 370 CDD SGNH_plant_lipase_like 32 349 IPR035669 -
Lapu1g01377 370 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 31 360 - -
Lapu1g01377 370 SUPERFAMILY SGNH hydrolase 29 346 - -
Lapu1g01377 370 FunFam GDSL esterase/lipase APG 24 350 - -
Lapu1g01377 370 Gene3D SGNH hydrolase 25 351 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01377 Lapu-Chr1 26569244 26572843 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01377 32 362 Acyl Lipid Metabolism Gene Families AT4G10950 35.435 7.96e-66 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01377 - - gmx:100795251 665.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01377 1 26569244 26572843 Lapu1g01377 1 26569244 26572843 ECH