Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01373 ATGGGCTCTTTCCTTTCGTCTCTCTTAGGTGTCGGCCCCGGCGATGAGCCCTCGAATTCGGAGGGGGTTTCTCCCGTCACGTCGTTCCACTCGTCGGCGCGTTGGCAGCTCCACTTCAACGAGCTCAAAGACACCCCTAAGCTCGTTGTGATAGATTTCTCGGCGTCGTGGTGCGGTCCTTGCAAATTTATAGAGCCAGCGATTCACGCCATGGCCGCAAAGTTCACTGACGTTGACTTCGTCAAGATTGACGTCGATGAATTATCAGATGTGGCGCAGGAGTTTCAGGTGCAGGCGATGCCGACGTTCGTGTTAATGAAGAAAGGGAAGGAAATTGAAAGGGTTGTTGGCGCCAAGAAGGACGAGCTGGAGAGGAAGGTTGAGAAGCATCGGGCTTAG 399 0.5388 MGSFLSSLLGVGPGDEPSNSEGVSPVTSFHSSARWQLHFNELKDTPKLVVIDFSASWCGPCKFIEPAIHAMAAKFTDVDFVKIDVDELSDVAQEFQVQAMPTFVLMKKGKEIERVVGAKKDELERKVEKHRA* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01373 132 Pfam Thioredoxin 40 128 IPR013766 -
Lapu1g01373 132 Coils Coil 120 132 - -
Lapu1g01373 132 ProSitePatterns Thioredoxin family active site. 50 68 IPR017937 -
Lapu1g01373 132 Gene3D Glutaredoxin 14 132 - -
Lapu1g01373 132 SUPERFAMILY Thioredoxin-like 39 130 IPR036249 -
Lapu1g01373 132 PRINTS Thioredoxin family signature 57 66 - -
Lapu1g01373 132 PRINTS Thioredoxin family signature 49 57 - -
Lapu1g01373 132 PRINTS Thioredoxin family signature 96 107 - -
Lapu1g01373 132 CDD TRX_family 38 128 - -
Lapu1g01373 132 FunFam Thioredoxin 25 132 - -
Lapu1g01373 132 ProSiteProfiles Thioredoxin domain profile. 6 132 IPR013766 -
Lapu1g01373 132 PANTHER THIOREDOXIN 26 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01373 Lapu-Chr1 26509825 26511331 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01373 K03671 - fve:101300360 213.001
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01373 1 26509825 26511331 Lapu1g01373 1 26509825 26511331 ECH