Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01361 ATGCCACTACCCAAATACAGCATGCACTTGGGTCTTTGTTTAATCTTATTATATGTCCATGCCGTAGTTGCCTTTGCAGCAAACTTTGATGAATCAAGGCATCAATCACAAGACTGGTTAAACCATGGTGGAGATTTGTTCAACAGAAGATATGCTTACAAGGAGCGTAAGATCAGCCCCAAAACCGCACCAGACCTACGTATGAAGTGGAAATTCTATGCTGGCAAAGACATCACTGCAACAGCAGCCATATATGATGGTACCCTTTATTTTCCAAGCTGGAATGGTAACATCTATGCAGTTAAAGAAGCTGATGGATCGCTTGTTTGGAAGCAAAACTTGGAGAAATTGACAGGTCTAAAAGCACCTGAAGGCCTTGTTGAGAATGTAAATTGGACAGTGTCACGGTCAACTCCCGCAGTGACTGAGGATTTACTGTTGTTTGGAATTTATGGTCCTGCTACTGTTATTGCTGTCAAAAGAAGAACAGGTGAGTTTGTGTGGAAGACCACTTTGGATTACCATCCTGATGCACTCATCACCATGTCTGGAACATACTACAACAGAGGTTACTATGTTGGAACATCTTCCCTGGAGTCACTTGAAACCCTTGAGAAGTGCTGCACGTTTCGTGGAAGTTTTGTAAAACTTAATGCTCGATCCGGTCGCATCTTGTGGAGGACCTATATGATACCAGATAACAATAACAGAAGAGGAGAATATGCAGGAGCTGCCATTTGGGGAAGCAGTCCTTCCATTGATGTGAAAAGAAACCATGCCTATATTGGCACAGGGAACCTCTATTCTGCCCCATTACGCATACGCCAGTGTCGAGAGAGACAAATTAATCGAACTCAGCATACTCAACAAGACGAGTGTGTTGAACCAGACAACCACTCCAACTCAATCTTAGCCCTTGATTTGGATTCTGGGAAGATCATATGGTACCACCAGTTTGGAGGCTACGATGTATCTGTCATAGTATGTACCGGTTCTTCCACACCTAGTCCTAATTGTCCTCCTCAGGCAGACAAACCAGATGTTGATTTTGGGGAGGCACCAATGATGTTGACTGCATATATAAATCGAATCAAGAAAGATATTGTCGTTGCAGTCCAGAAAAGTGGCATTGCATGGGCTTTGGATCGCAATAATGGTCGCCTCGTTTGGTATACGGAAGCTGGGCCATACGGGCTCGCAGGAGGTGGATCATGGGGTGCAGCAACTGATGAAAAGAAGGTTTACACGAACATTGTGAATTCTGATGCCAAAAACTTCACTCTGGCACCCTCAAATAAGATTACAACAGCTGGTGGGTGGGTGGCAATGGATGCAAACAATGGTAGAGTTCTATGGTCAACAGCAAATCCTAGTAACAGCACTGCTTATGGCCCTGTCAGTGTTGCAAATGGTGTTGTGTTTGCTGGATCCGCTGATAGAATGGGTTACATATATGCAATTGATGCAGAGAGTGGGAAAATTTTATGGTCCTATAAAACTGGAGCCAGTGTCTATGGAGGCGTTTCAATCAGCAAAGGGTGCATATATGTGGGCCATGGATACAATGTTGCTTATGGCCATACCTTGAATTTAACAGATGGAATCTTTCTCTTTGCTTTCTGTGTCTAA 1629 0.4377 MPLPKYSMHLGLCLILLYVHAVVAFAANFDESRHQSQDWLNHGGDLFNRRYAYKERKISPKTAPDLRMKWKFYAGKDITATAAIYDGTLYFPSWNGNIYAVKEADGSLVWKQNLEKLTGLKAPEGLVENVNWTVSRSTPAVTEDLLLFGIYGPATVIAVKRRTGEFVWKTTLDYHPDALITMSGTYYNRGYYVGTSSLESLETLEKCCTFRGSFVKLNARSGRILWRTYMIPDNNNRRGEYAGAAIWGSSPSIDVKRNHAYIGTGNLYSAPLRIRQCRERQINRTQHTQQDECVEPDNHSNSILALDLDSGKIIWYHQFGGYDVSVIVCTGSSTPSPNCPPQADKPDVDFGEAPMMLTAYINRIKKDIVVAVQKSGIAWALDRNNGRLVWYTEAGPYGLAGGGSWGAATDEKKVYTNIVNSDAKNFTLAPSNKITTAGGWVAMDANNGRVLWSTANPSNSTAYGPVSVANGVVFAGSADRMGYIYAIDAESGKILWSYKTGASVYGGVSISKGCIYVGHGYNVAYGHTLNLTDGIFLFAFCV* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01361 542 PANTHER QUINOPROTEIN ALCOHOL DEHYDROGENASE (CYTOCHROME C) 14 542 - -
Lapu1g01361 542 SMART ire1_9 407 455 IPR018391 -
Lapu1g01361 542 SMART ire1_9 362 393 IPR018391 -
Lapu1g01361 542 SMART ire1_9 139 171 IPR018391 -
Lapu1g01361 542 SMART ire1_9 251 318 IPR018391 -
Lapu1g01361 542 SMART ire1_9 465 499 IPR018391 -
Lapu1g01361 542 SMART ire1_9 82 113 IPR018391 -
Lapu1g01361 542 SMART ire1_9 183 229 IPR018391 -
Lapu1g01361 542 Pfam PQQ-like domain 69 101 IPR002372 -
Lapu1g01361 542 Pfam PQQ-like domain 215 498 IPR002372 -
Lapu1g01361 542 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 35 508 IPR011047 -
Lapu1g01361 542 Gene3D - 23 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01361 Lapu-Chr1 26409603 26412195 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01361 - - gmx:102668917 966.452
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01361 1 26409603 26412195 Lapu1g01361 1 26409603 26412195 ECH