Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01360 ATGGCACAATTCGAGAAAATCACCTTTTTTATAATTTCCATGTTTGTAATATGCCTACTGACAAGTTCATTATCCGAAGGTTCTGATGACGTGTTCACCTCAACAGAAAAGACACAAAACTGGTTAAACCATGGTGGGGATCTATACAACAGAAGATATGCCAGCACGGAGCAGAAGATCAGTGTTGAAACTGTTTCCAACTTACGTTTGAAGTGGAAGTTCCACGCAGGCAAAGACATAACTGCAACTCCAGCTATTTTTGATGGCATACTCTACTTTCCATCGTGGAATGGGGACATTTTTGCGGTGAGAACAGGAGATGGATCTCTGGTGTGGAGGAAGAACTTGCAGAATCTAACGGGGCTAAGTGCAACAGGGTTTGTGGCAGGTGTTAACTGGACAGTGGCAAGAGCAACACCAACCATAGCAGAAGATGATCTTGTGGTGGTTGGAATATATGGTCCTGCACTTGTTATTGCTCTGAAAAGATCAACAGGAGAGTTAGTTTGGAAGACACGTTTGGACAGCCATAACTCAAGTGTTATCACCATGTCTGGAACCTATTACAAAGGGGCTTATTATGTTGGGACATCTTCACTAGAAGAAGGCCTCACACCTGAAGAATGTTGCACCTTTCGAGGAAGCTTCTCAAAGGTAGATATTAAATCTGGTGTGATTTTGTGGCAAACCTTCCTGCTACCTGATAATCATGGAGAAAAAGGAGAATATGCTGGAGCAGGTGTATGGGGAAGTAGCCCTTCCATTGATGCATCAAGGAACCACATATATATTGCCACTGGAAACTTGTACTCTGCTCCTTTGGACATACGTGAATGTCAAGAAAGAGAAAATAACGCAACACGACCCACTCATCCTGATAACTGTGTTGAGCCAGACAATCACTCTGATTCAATCCTTGCACTTGACTTGGATGATGGAAAAATCAAATGGTACCACCAATTGGGAGGGTATGACGTGTGGTTATCTTCATGCAGAAATTTGTCAACACCTAATTGTCCACCTGGTCCTAACCCAGATGCTGATTTTGGGGAGGCACCAATGATGCTCACGATTGATGTCAACAAAACAAAAGAAGATGTTGTTGTTGCTGTACAAAAGAGCGGTTTTGCTTGGGCTTTGCACCGTCATGACGGCAAGCTAATTTGGTCTACGGAAGCTGGAGCAGGAGGGGTTTCAGGAGGTGGAACATGGGGAGCAGCCACTGACAAAGAAAGGGTATACACTAACATTGCTAATTCGGATGGCAAAAACTTCACTCTTAGACCATCCAACAAGACTACAACAAGTGGAGGGTGGGTGGCAATGGAGGCAAAGAGTGGCAACATCTTGTGGTCCACAGAAAACCCTAGTAATGCCACTGCACATGGTCCTGTTACTGTAGCTAATGGCATTGTGTTTGCAGGATCCACAGCTTCAAAAGGGCCTGTTTATGCAATTAACGCTGAGACTGGCGACATTGTATGGTCTTATGAGACTGGATCAACAGTGTATGGTGGCATGTCCATCAGTGACGGATGCATATATGTTGGAAATGGTTATAAGATTGGCCTTGGATTGGTTATTGGAAATTATACTGCTGGAACTTCACTTTTTGCCTTTTGTGTCTAA 1629 0.4377 MAQFEKITFFIISMFVICLLTSSLSEGSDDVFTSTEKTQNWLNHGGDLYNRRYASTEQKISVETVSNLRLKWKFHAGKDITATPAIFDGILYFPSWNGDIFAVRTGDGSLVWRKNLQNLTGLSATGFVAGVNWTVARATPTIAEDDLVVVGIYGPALVIALKRSTGELVWKTRLDSHNSSVITMSGTYYKGAYYVGTSSLEEGLTPEECCTFRGSFSKVDIKSGVILWQTFLLPDNHGEKGEYAGAGVWGSSPSIDASRNHIYIATGNLYSAPLDIRECQERENNATRPTHPDNCVEPDNHSDSILALDLDDGKIKWYHQLGGYDVWLSSCRNLSTPNCPPGPNPDADFGEAPMMLTIDVNKTKEDVVVAVQKSGFAWALHRHDGKLIWSTEAGAGGVSGGGTWGAATDKERVYTNIANSDGKNFTLRPSNKTTTSGGWVAMEAKSGNILWSTENPSNATAHGPVTVANGIVFAGSTASKGPVYAINAETGDIVWSYETGSTVYGGMSISDGCIYVGNGYKIGLGLVIGNYTAGTSLFAFCV* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01360 542 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 37 506 IPR011047 -
Lapu1g01360 542 Gene3D - 25 510 - -
Lapu1g01360 542 SMART ire1_9 253 320 IPR018391 -
Lapu1g01360 542 SMART ire1_9 406 454 IPR018391 -
Lapu1g01360 542 SMART ire1_9 140 173 IPR018391 -
Lapu1g01360 542 SMART ire1_9 84 115 IPR018391 -
Lapu1g01360 542 SMART ire1_9 464 498 IPR018391 -
Lapu1g01360 542 Pfam PQQ-like domain 439 516 IPR002372 -
Lapu1g01360 542 Pfam PQQ-like domain 72 317 IPR002372 -
Lapu1g01360 542 PANTHER QUINOPROTEIN ALCOHOL DEHYDROGENASE (CYTOCHROME C) 14 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01360 Lapu-Chr1 26398992 26403058 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01360 - - gmx:100791552 966.452
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01360 1 26398992 26403058 Lapu1g01360 1 26398992 26403058 ECH