Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01352 ATGTATACTGACGGTTACACTGCTCTAGTTACAAACTTATCTCCAAGAGCAACAGAGAATGATGTACACAATTTTTTTGCTTATTGTGGTCTAATTGAGCATGTTGAAATAATAAGATCTGGTGAAAATGCATCTACTGCATATGTGACTTATCGGGATGCTTATGCCCTGGAAACTGCACTATTGCTAAATGGATCAATGATATTGGACCAATGTATTTTCATTTCACGCTATGAAGCTTATGTAAATGACTATGATTATTGGGGCAGTCATGTATCAAAGCCTGAAGACAGTATTACAACCTCACAAGGTGATCGCATGGATAAGTTTGTTTCTTCGCCTGGAGAAGCACTAACCCTGGCACAGGTGGTTGTCAAAACAATGGTGGCTAAGGGATATGTGTTGGGCAAAGATGCATTTGTCATGGCAAAAGCTTTTGATGAATCTCATAATGTGTCATCTACAGCATCATCAAAGGTTGCTGAACTCAGCAATAAGATTGGGTTGACTGATACCATAAATTCAGGCATTGAAACTTTTAAATCTGTGGATGAGAAGTATCACGTTACAGACTTCACCAAATCAGCTGCAACAGTGACAGGGACAACAGCTATAGTTGTGGCATCAGTTACCAGTAAAGCTGCTGTGGCAGCTGGAAATGCTATAGCCAACAGTAGCTACTTTGCCAAAGGTGCTCTTTGGGTTTCAGATATGTTGACACGTGCAGCCAAAGCAGCTGCTGATTTGGGTCAGAGTGAAAAGAAGTGA 768 0.4062 MYTDGYTALVTNLSPRATENDVHNFFAYCGLIEHVEIIRSGENASTAYVTYRDAYALETALLLNGSMILDQCIFISRYEAYVNDYDYWGSHVSKPEDSITTSQGDRMDKFVSSPGEALTLAQVVVKTMVAKGYVLGKDAFVMAKAFDESHNVSSTASSKVAELSNKIGLTDTINSGIETFKSVDEKYHVTDFTKSAATVTGTTAIVVASVTSKAAVAAGNAIANSSYFAKGALWVSDMLTRAAKAAADLGQSEKK* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01352 255 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 6 80 IPR000504 GO:0003723
Lapu1g01352 255 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 7 254 - -
Lapu1g01352 255 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 10 72 IPR000504 GO:0003723
Lapu1g01352 255 SMART rrm1_1 7 76 IPR000504 GO:0003723
Lapu1g01352 255 SUPERFAMILY RNA-binding domain, RBD 4 81 IPR035979 GO:0003676
Lapu1g01352 255 Gene3D - 2 82 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01352 Lapu-Chr1 26337971 26342471 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01352 - - gmx:100784005 428.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01352 1 26337971 26342471 Lapu1g01352 1 26337971 26342471 ECH