Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01141 ATGGCGCTGAGGTTGAGTACTGTGGTTTCAGGTGTTGGTCCGAGGCATTCGGGTAAACCTAGGTTAAAGTTGAGGTTCAGAATCAGAAGTGGTTGTTGTGCTACAGTTACGAATATGGCCTTCACTGAAACCCCTTCGACCTCCAAAGTCATTGATTCCCATCTACACGTGTGGGCTTCACCTCAAGAGGCTGGTAAATTCCCTTATTTTCCTGGACAAGAACCCACTTTACCAGGAAATGCCGATTTTTTGCTCCAGTGTATGGAGGAGGCAGGAGTAGATGGTGCACTCATTGTGCAACCAATCAATCATAAATTTGATCATAGTTATGTCACAAGCGTTTTGAAGAAATACCCGACCAAATTTGTTGGTTGTTGCCTTGCTAATCCAGCTGATGATGGAAGCGGGCTTAAGCAATTTGAAGATCTTGTTTTGAAGGATGGTTATCGTGCTGTTCGATTCAATCCATATTTGTGGCCAACTGGACAAAAGATGACAAATAAAGTTGGAAAGGCAATTTTCCAAAGGGCTGGGGAACTCAATGTGCCAGTGGGCTTCATGTGTATGAAGGGGCTTGGTCTGCATATTTCTGAAATCGAGCAACTGTGCACAGAATTTCCATCAACAGTTGTATTGCTTGATCACTTGGCCTTTTGTAAACCACCAATAAATGATGAGGAAGGTCTTGTCTTTTCTCAACTTTTAAATCTGTCTAGATTCCCACAAGTACATGTGAAATTTAGTGCCCTTTTCAGAGTGTCAAGAGGACAGTTTCCTTATCTGGATTTGTCTCCTCTCTTATCCCAAGTTGTCTCTCATTTTGGTGCTAACCGTGTAATGTGGGGCAGTGATTTTCCATTTGTTGTTCCTGAATGTGGTTACAAAGGAGCCAAAGAAGCAGTGCATCATATTGCCAATGAGATCTCTTTGCCTTTATCAGATTTAGAGTGGATCATGGGAAGGACAGCTACACAACTCTTCCAAGACCATTTGACTCCACTCAAGAATTGA 1011 0.4263 MALRLSTVVSGVGPRHSGKPRLKLRFRIRSGCCATVTNMAFTETPSTSKVIDSHLHVWASPQEAGKFPYFPGQEPTLPGNADFLLQCMEEAGVDGALIVQPINHKFDHSYVTSVLKKYPTKFVGCCLANPADDGSGLKQFEDLVLKDGYRAVRFNPYLWPTGQKMTNKVGKAIFQRAGELNVPVGFMCMKGLGLHISEIEQLCTEFPSTVVLLDHLAFCKPPINDEEGLVFSQLLNLSRFPQVHVKFSALFRVSRGQFPYLDLSPLLSQVVSHFGANRVMWGSDFPFVVPECGYKGAKEAVHHIANEISLPLSDLEWIMGRTATQLFQDHLTPLKN* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01141 336 SUPERFAMILY Metallo-dependent hydrolases 50 327 IPR032466 -
Lapu1g01141 336 Pfam Amidohydrolase 51 327 IPR006680 GO:0016787
Lapu1g01141 336 FunFam Catalytic/ hydrolase 39 329 - -
Lapu1g01141 336 Gene3D - 40 330 - -
Lapu1g01141 336 PANTHER 2-AMINO-3-CARBOXYLMUCONATE-6-SEMIALDEHYDE DECARBOXYLASE 48 330 IPR032465 GO:0016831
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01141 Lapu-Chr1 24389219 24394047 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01141 - - pvu:PHAVU_008G016700g 652.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01141 1 24389219 24394047 Lapu1g01141 1 24389219 24394047 ECH