Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01139 ATGATGCAGATGAAGAACAGCCCTTATTTTTGGAGTACGGCTGAGCCTGGTTATTACAGAGTACCCTCTAAGGTGGTTTCGATCCCGGTTCATTTCGTGGGTTCAGAGCGCACCAGAACTGATTCTGCCGTAAAGATTCAGAGGATGTTGAGAGGGTTCCTTGTGAGGAACGCAATGAAGAAGATCGCCGCCATGAGGGTGGAGTTGGAGCGGATTGAGAGCGAGATTCGAGTGGAAGTGTTGAGGAGGGAACAGAGAGAGAGGGTGAGGGTGATCGAGACCATCATGAACTTGCTTCTTAGGCTGGATTCTGTTCGGGTATTGCACTACTCTGGCCTCAGGGAGTGCAGAAAGTTTGTCATAAAAAAGGCTATTGCCCTTCAAGAAATGGTTGATGAAATGGCGGACCCTGCTTCTGAGGGTGTG 426 0.4953 MMQMKNSPYFWSTAEPGYYRVPSKVVSIPVHFVGSERTRTDSAVKIQRMLRGFLVRNAMKKIAAMRVELERIESEIRVEVLRREQRERVRVIETIMNLLLRLDSVRVLHYSGLRECRKFVIKKAIALQEMVDEMADPASEGV 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01139 142 Pfam BAG domain 74 133 IPR003103 GO:0051087
Lapu1g01139 142 Pfam IQ calmodulin-binding motif 40 59 IPR000048 GO:0005515
Lapu1g01139 142 SUPERFAMILY BAG domain 57 135 IPR036533 GO:0051087
Lapu1g01139 142 ProSiteProfiles BAG domain profile. 58 135 IPR003103 GO:0051087
Lapu1g01139 142 Coils Coil 55 75 - -
Lapu1g01139 142 ProSiteProfiles IQ motif profile. 39 68 IPR000048 GO:0005515
Lapu1g01139 142 Gene3D BAG domain 35 138 IPR036533 GO:0051087
Lapu1g01139 142 PANTHER BAG DOMAIN CONTAINING PROTEIN, EXPRESSED 22 135 IPR040400 -
Lapu1g01139 142 SMART BAG_1 58 135 IPR003103 GO:0051087
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01139 Lapu-Chr1 24384819 24385295 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01139 - - vun:114185998 209.534
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01139 1 24384819 24385295 Lapu1g01139 1 24384819 24385295 ECH