Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01050 ATGCTCTCTGTTTTCTTCCTGTCTATAGGTAACATTGTCTCATTCATGGTGTTCTTGGCACCATTGCCAACCTTCTATACAATTTACAAGAACAAATCATCCCACGGGTTTCAATCAATTCCATATGTTGTTGCACTTCTTAGTGCACTGTTACTTCTGTATTATGGCTTCATAAAGACCAATGCTATTTTGATTATCACCATCAACTGTATTGGATGCTTTATAGAACTTTCATACCTAGCAATGTACATTATATATGCTTCAAAGAAGCAGAAGATTTCCACTTTGGTAATGATACTCATTGCTGACGTTGGAGGTTTTGGCTTAACCATGTTAATCACCACCTTTGCTGTGAAGGGAATTGGCCGTGTTCATGCCGTGGGATGGATTTGTGCCATTTTTAACATTGCAGTGTTCGCGGCTCCCTTAAGCATAATGAAAAAGGTTATAAAAACCAGAAGTGTAGAGTACATGCCATTTTCGTTGTCCTTGTTTCTTACCCTCTGTGCCACCATGTGGTTTTTCTATGGACTCTTCGACAAGGATAAGTTCATTATGCTGCCAAATGTGCTAGGATTTCTGTTTGGCGTCTCTCAAATGATCTTATACATGATATACAAGAATGCTGAGAAGAATACGAAAACCGGTTGTTCAGAGCAGCAAGATACTGAGGACACAGTGAACACAAAACAGCACAGCTGCGATGACAACAAACTTGATTTCCCTTCAGTGGTGGAAATGAAAGATAATCAACTCAATCAAGTGTGA 768 0.3932 MLSVFFLSIGNIVSFMVFLAPLPTFYTIYKNKSSHGFQSIPYVVALLSALLLLYYGFIKTNAILIITINCIGCFIELSYLAMYIIYASKKQKISTLVMILIADVGGFGLTMLITTFAVKGIGRVHAVGWICAIFNIAVFAAPLSIMKKVIKTRSVEYMPFSLSLFLTLCATMWFFYGLFDKDKFIMLPNVLGFLFGVSQMILYMIYKNAEKNTKTGCSEQQDTEDTVNTKQHSCDDNKLDFPSVVEMKDNQLNQV* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01050 255 FunFam Bidirectional sugar transporter SWEET 4 92 - -
Lapu1g01050 255 PANTHER RAG1-ACTIVATING PROTEIN 1 12 219 IPR047664 -
Lapu1g01050 255 Gene3D - 7 93 - -
Lapu1g01050 255 Gene3D - 122 219 - -
Lapu1g01050 255 FunFam Bidirectional sugar transporter SWEET 123 215 - -
Lapu1g01050 255 Pfam Sugar efflux transporter for intercellular exchange 8 90 IPR004316 GO:0016020
Lapu1g01050 255 Pfam Sugar efflux transporter for intercellular exchange 126 210 IPR004316 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01050 Lapu-Chr1 23714177 23715432 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01050 9 225 Miscellaneous Gene Families AT2G39060 61.364 3.01e-86 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01050 K15382 - gmx:100306393 432.18