Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00978 ATGAAGAGCTCTCTGAAGAAACTGCGGGGTCTGGCGCTTCACAATCACAATCACAAGCATGCCTCCTCCCACTCCATCCAGCCTCTGGGCCAGCTTGACGAGCTCTCTCGGGCCACGCAGGACATGGAAGACATGAGGGACTGCTATGACACCTTGCTTTCCGCCGCCGCTGCAACCGCCAGCAGCGCCTATGAATTCTCCGAGTCCTTGCGGGACATGGGCTCTTGTCTTCTCGAGAAGACCGCTTTAAACGACCACGGAGATGAAACTGGAAAACTTATCCTCATGCTGGGCAAAATCCAGTTCAAACTCCACAAACTCATTGATGACTACCGTTCTCATATAATCCAGACAATTACCATTCCCTCAGAGTCTCTCTTGAATGAACTTCGAATTGTTGAGGAGATGAAGCGGCAATGTGATGAGAAAAGAGACTTATATGAGTATATGGTAGCAAGATACAGAGAAGGAGGCAGGTCTAAAGGCGGGAAAGGGGAAACTTTTTCTTTGCAGCAGTTGCAAACTGCTCATGATGATTATGATGAAGAGGCTACTTTGTTTGTTTTCCGATTGAAATCTCTGAAGCAAGGACAATCACGTAGTCTTCTAACACAGGCAGCGCGTCACCATGCTTCTCAGTTGTGTTTCTTCAAGAAAGCAGTCAAATCCCTTGAGACAGTAGAACCACTTGTACAATCTGTAACTGAACAGCAGCACGTTGATTACCTGTTCAGTGGTCTTGAAGAGGAGGACGGGTATGAAGGTGACTATGGAGATGATGATGGCGGTGGTTATGATGAGAATGATGATGGTGAGCTGAGTTTTGATTATGGACAAACTGAACAAGACCAAAATGTTTCTACATCACGAAACTCCATGGAGTTGGATCAGGTAGAACTTACACCTCCTGGAGGTTTTACAGCTGAAGCTTCTAAGGAAAACTTAGACAAACTTCAAAGGAATTTGTTTTCCTTTAGGGTTAGAACAGGGAGCCAATCTGCCCCGCTTTTTGCCGATGCTAAACCTGATACAAGTGAAAAACCGAGACAGATGCGCCCATCTTTATCACGAAAGTTTAGTTCATATGTTCTACCCACACCAGTTGATGCTAAGAGTTCAATCTCTTCAGGTTCAAATAAACCAAAACCTTCCAAAGTGCAGGCGAATTTAAGTGAACCTACAAAGAACTTGTGGCATTCATCCCCATTGGAACAAAAGAAACCTGAAAAAGATATCACTGATGAATTTTCTGGTTCTATTGTCAGAAGTGCTCAGTCAGTACTCAAGGAAAGTAACAGCAATACTGCCTCCACGAGATTGCCCATTCCTCTGGGAGATAGTCTTTTATCCTCAAACCGTGATTACATTTCTGCTCACTCTAAAAAGATTAAAAGACATGCCTTTTCTGGCCCGTTGACAAGTAATCCCAGGCCTACCAAGCCGGTTTTGGTAGAAAGTGTTCAACTGTTCTCTGGACCTCTTTTGCCAACTCCAATTCCTCAGCCTCGATCATCATCTCCAAACGTATCTCCCACTGCTTCTCCCACTCTTATGTCTTCACCCAAAATAAGTGAGCTTCATGAACTTCCTAGGCCTCCAACCAGTTTCCCGTCCAATTCAAGGCTTTTAAGTTTGGTGGGTCATTCGGGTCCATTGGTGTCTAGAGGTCCAAAGGTTTCCTCTGCAAGTAATTTGGTTGCATCAAGTGCTGCATCTCCATTGCCAATGCCACCTCAGGCCATGGCTCGTAGTTTCTCCATACCTTCAAGTGGCGCTAGAGTTGCAGCATTACATGTGCCTAGAACACTAGATTCTTCTCATATATCATCTATATCTGAGAATATTGCTTCTCCTCTGATGCCACTAGCGTTATCTAGTAGTCAGCCATCATCAGATTGCTGA 1902 0.449 MKSSLKKLRGLALHNHNHKHASSHSIQPLGQLDELSRATQDMEDMRDCYDTLLSAAAATASSAYEFSESLRDMGSCLLEKTALNDHGDETGKLILMLGKIQFKLHKLIDDYRSHIIQTITIPSESLLNELRIVEEMKRQCDEKRDLYEYMVARYREGGRSKGGKGETFSLQQLQTAHDDYDEEATLFVFRLKSLKQGQSRSLLTQAARHHASQLCFFKKAVKSLETVEPLVQSVTEQQHVDYLFSGLEEEDGYEGDYGDDDGGGYDENDDGELSFDYGQTEQDQNVSTSRNSMELDQVELTPPGGFTAEASKENLDKLQRNLFSFRVRTGSQSAPLFADAKPDTSEKPRQMRPSLSRKFSSYVLPTPVDAKSSISSGSNKPKPSKVQANLSEPTKNLWHSSPLEQKKPEKDITDEFSGSIVRSAQSVLKESNSNTASTRLPIPLGDSLLSSNRDYISAHSKKIKRHAFSGPLTSNPRPTKPVLVESVQLFSGPLLPTPIPQPRSSSPNVSPTASPTLMSSPKISELHELPRPPTSFPSNSRLLSLVGHSGPLVSRGPKVSSASNLVASSAASPLPMPPQAMARSFSIPSSGARVAALHVPRTLDSSHISSISENIASPLMPLALSSSQPSSDC* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00978 633 MobiDBLite consensus disorder prediction 250 276 - -
Lapu1g00978 633 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 1 631 IPR037488 -
Lapu1g00978 633 MobiDBLite consensus disorder prediction 494 519 - -
Lapu1g00978 633 CDD BAR 64 229 - -
Lapu1g00978 633 MobiDBLite consensus disorder prediction 334 449 - -
Lapu1g00978 633 MobiDBLite consensus disorder prediction 418 449 - -
Lapu1g00978 633 SUPERFAMILY BAR/IMD domain-like 34 233 IPR027267 -
Lapu1g00978 633 Gene3D Arfaptin homology (AH) domain/BAR domain 31 242 IPR027267 -
Lapu1g00978 633 MobiDBLite consensus disorder prediction 402 416 - -
Lapu1g00978 633 MobiDBLite consensus disorder prediction 250 309 - -
Lapu1g00978 633 MobiDBLite consensus disorder prediction 354 401 - -
Lapu1g00978 633 MobiDBLite consensus disorder prediction 277 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00978 Lapu-Chr1 23030662 23036932 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00978 - - gmx:100778278 1004.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00978 1 23030662 23036932 Lapu1g00978 1 23030662 23036932 ECH