Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00589 ATGACCCTCCGTCTTGTGTCAGCACCGCCGTCGTTCTCTCTCTTCACCTGCCGCGCCACTGCCTCCACCGCCCTCCCTCCACCGACGCCAACGTCCGCTTCTTCAATTCCACAGTCTCCGTCGTTAACGTGCGCACTTCACTGCCCGCACTTCCAATCGTGTTCGGGGTGCACGCACGAGTTCAACCTCCACCGTCCGGTTATATTGGACGATGCCACCGATTTCTTTCGGAAACACGGCGTCTCCGACTTCACATTTGACACGTGTAAACTGTGGGGTTGGAGGTGCCGTGCGAAATTGGCCGTGCGTGGCTCTTCAACGGAGCCTCTTATTGGGCTCTATGAGGAGGGTACTCATAATATAGTTGACATTCCACAATGCAAAGCTCATCATCCTAATATTAATGCTGCTGTGGAGCTGCTTAGACAGGGTATTACTGAATTAGGTGTTCGGCCATATGTTGAAGATGAAGGTACTGGTGATTTGCGATATGTTCAGATGGCTGTGACAACATATAATACATCTCTTCCTGCGGCTGAAAGATATATGAATGGAAAAGTTCAGATTACATTGGTTTGGAATTCGAGAAATGAGAATTCACCTAGTTCCGACAAACTGAATGAATTGGCAAATTTTCTATGGAAAAATGGTGGGCCACGGAGCAGGGTTCATTTAATTCACTCTGTGTGGGCCAACTTTCAGACTTCTACTAACAATATAATTTTTGGGAATAGATGGAGACATCTTCTTGGAGAAAAAGACTTTTGGGAACATGTTGGTGGAATTGATGTATCCTTGGCACCTTCTAGTTTTGGCCAAGCAAACACACGGGCTTTTGATACCTTGCTGCGGAAGTTACAGAAATATGTTCCGTATGAATCAGCTGTTGCTGATTTGTATGCTGGAGCTGGGGTCATTGGGTTGTCATTAGCTGCCGCAAGAAAGTGCAGATCTGTTAAATGCATTGAGATAAACAAAGAGTCGAAGGCATCATTTGAGAAGACCATTGAACGTTTACCTGCCTATGTTGACAGCAGTATTACTTGGCATCATGCAGATGCTTCAAAAGAGCCTTTTTTGTGGCTTCTGGGATCAGATGTTGTTGTCATTGATCCTCCTAGAAAAGGATTAGATGCATCTCTTATTGATGCATTGAAGAATGTATCATCAATCGAGCGTAAAGCCTTGTCATCTTCTGAAAGATCAAACTCATTCCAGGAAGAGAAAAGACCATGGGTTTTACGTGCTAACGAAGCTTCAGTCCAGATTGGAAGCAAACCATCACCGGCTAACATCCCTCAATCAGTGCCACAAACCCTTATTTATATAAGTTGTGGATGGGAAAGTTTTAAAGAGGACTGCAAGTCATTGTTGTCGAGTAAGGCATGGTATTTGGAAAAAGCTCATGGATTTAATTTCTTTCCTGGTACCCAGAGCATTGAAGTTCTAGCAGTGTTCAAAAGGGGCTCTCAGGAAAAGAAACCAGGAAAGAAAAAGAAAAAACACTTGCGGAGAGCTGTGAAACATTAA 1530 0.4444 MTLRLVSAPPSFSLFTCRATASTALPPPTPTSASSIPQSPSLTCALHCPHFQSCSGCTHEFNLHRPVILDDATDFFRKHGVSDFTFDTCKLWGWRCRAKLAVRGSSTEPLIGLYEEGTHNIVDIPQCKAHHPNINAAVELLRQGITELGVRPYVEDEGTGDLRYVQMAVTTYNTSLPAAERYMNGKVQITLVWNSRNENSPSSDKLNELANFLWKNGGPRSRVHLIHSVWANFQTSTNNIIFGNRWRHLLGEKDFWEHVGGIDVSLAPSSFGQANTRAFDTLLRKLQKYVPYESAVADLYAGAGVIGLSLAAARKCRSVKCIEINKESKASFEKTIERLPAYVDSSITWHHADASKEPFLWLLGSDVVVIDPPRKGLDASLIDALKNVSSIERKALSSSERSNSFQEEKRPWVLRANEASVQIGSKPSPANIPQSVPQTLIYISCGWESFKEDCKSLLSSKAWYLEKAHGFNFFPGTQSIEVLAVFKRGSQEKKPGKKKKKHLRRAVKH* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00589 509 Gene3D Vaccinia Virus protein VP39 424 486 IPR029063 -
Lapu1g00589 509 ProSiteProfiles SAM-dependent methyltransferase RNA m(5)U-type domain profile. 52 489 IPR010280 GO:0006396|GO:0008173
Lapu1g00589 509 Pfam Conserved hypothetical protein 95 286 408 - -
Lapu1g00589 509 Gene3D - 95 271 - -
Lapu1g00589 509 PANTHER BNAA06G32370D PROTEIN 30 493 - -
Lapu1g00589 509 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 46 488 IPR029063 -
Lapu1g00589 509 CDD AdoMet_MTases 296 388 - -
Lapu1g00589 509 Gene3D Vaccinia Virus protein VP39 272 423 IPR029063 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00589 - - gmx:100816889 908.286