Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00572 ATGCAAGCCTGGATATTCAGGTCCTTCCAACCTTCCCACAAGAAGAAACACCCTTCCACCCCCAACTCCCGCCTTCTCACCCTCTTCGCCGCTACACTCGCCACCACTCTCTTCCTCCTCTTCCTCTTCCGCCACATCCTCATTGACCCCAACAACCTCTGCATCTCCTCTGCCGCACCCATCCGCCTCACCGCCTCCGAGTCCACCATCGCCGCTGAGTTCGACGCCACACCCCTCACCCTCGTCACCATCCTCCACTACGCCACCGCGTTCTCGCTCCCGCAACAGACCAAGGGCGAGATCCGACGCACCTTCGACGTCCTCCAATCCCTCGCCCCATGCAACTTCCTCGTATTCGGTCTCGGCCACGACTCCCTCATGTGGGACTCCTTCAACCCACGAGGCACCACGTTGTTCCTGGAGGAGGATTCCAAGTGGACCGTCTCCGCCCTCCAACGCTTCCCCATCCTACACGCCCACACCGTTCGTTACTCCACGCGCCTCGCCGACGCCAAGACCCTTCTAACCTCCTACAAAAGGGATTGTGGCAGCGTCACCAGCAGCGATCATCCCTTAAAGGTTAACCGGCGGTGCATGCTGGCACTCAGCAACCTGCCGAATGACGTGTACGATCGTGATTGGGATGTGATCATGATCGACGGCCCGCGAGGGTATTTTGCCGCCGCCCCGGGGAGGATGGCGGTGATATACTCGACTGCCATGATGGCGCGTGCGAGAAGGAAATCAGGTGTGACGCACGTCTTTCTTCATGACGTGGATAGGGACGTTGAGAAACACTATGCCAAGGAATTTTTGTGCATGAAATATAGGGTTGGCGGTATCAGGAAGCTTTGGCATTTTGTTATTCCACCAGTTGTTAATGCTAGTGATATTACTCAGGGATTTTGTTGA 912 0.5669 MQAWIFRSFQPSHKKKHPSTPNSRLLTLFAATLATTLFLLFLFRHILIDPNNLCISSAAPIRLTASESTIAAEFDATPLTLVTILHYATAFSLPQQTKGEIRRTFDVLQSLAPCNFLVFGLGHDSLMWDSFNPRGTTLFLEEDSKWTVSALQRFPILHAHTVRYSTRLADAKTLLTSYKRDCGSVTSSDHPLKVNRRCMLALSNLPNDVYDRDWDVIMIDGPRGYFAAAPGRMAVIYSTAMMARARRKSGVTHVFLHDVDRDVEKHYAKEFLCMKYRVGGIRKLWHFVIPPVVNASDITQGFC* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00572 303 Pfam Polysaccharide biosynthesis 100 287 - -
Lapu1g00572 303 NCBIfam TIGR01627 domain 84 303 IPR006514 GO:0045492
Lapu1g00572 303 PANTHER OS11G0490100 PROTEIN 20 303 IPR006514 GO:0045492
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00572 Lapu-Chr1 17978608 17979519 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00572 - - gmx:100791438 475.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00572 1 17978608 17979519 Lapu1g00572 1 17978608 17979519 ECH