Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00545 ATGCCGGAGGAAGAAGTAGTTGAGCTCAAGTTCCGTCTCTACGATGGATCCGATATTGGACCCTTCCGTTACTCCCCTGCTTCCACCGTATCCATGCTCAAGGACCGGATTTTTGCAGAGTGGCCCAAAGACAAGAAAATTATACCAAAGGCAGCAAATGATATAAAACTGATAAGTGGTGGCAAAATTTTGGAGAACAACAGGACGGTTGACCAGTGTAGAATACCTTTAGGCGAACTTCCCAAAGGGGTTATTATCACCATGCATGTTGTGGTCCAGCCATCTTTGCTCAAAGCAAAAACAGGTATATTTCATTCTGGAATATGTTGTGTAACTGTTTTCTGTAGTATATACACACACATACACCTGAAAGAGCAGTTTCATGTAAATGTAAGAGAAAAAAGTTGA 408 0.4167 MPEEEVVELKFRLYDGSDIGPFRYSPASTVSMLKDRIFAEWPKDKKIIPKAANDIKLISGGKILENNRTVDQCRIPLGELPKGVIITMHVVVQPSLLKAKTGIFHSGICCVTVFCSIYTHIHLKEQFHVNVREKS* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00545 135 CDD Ubl_MUBs_plant 7 94 - -
Lapu1g00545 135 PANTHER UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN 1 101 IPR040015 -
Lapu1g00545 135 SUPERFAMILY Ubiquitin-like 2 95 IPR029071 -
Lapu1g00545 135 ProSiteProfiles Ubiquitin domain profile. 7 75 IPR000626 GO:0005515
Lapu1g00545 135 Pfam Ubiquitin-2 like Rad60 SUMO-like 6 100 IPR039540 -
Lapu1g00545 135 Gene3D - 1 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00545 Lapu-Chr1 17408691 17412544 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00545 - - gmx:100306698 186.422
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00545 1 17408691 17412544 Lapu1g00545 1 17408691 17412544 ECH