Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00544 ATGCACTACCAAGCAGCAGCGTCGTGGGGGAGCTACGTGACACCAAGGAACGCCGTGGTGGGAGACCCATTGGAGCGCATAGAGAGACTGGCATCAGAGAATGCGGTGGTGATATTCAGTGTGAGCACGTGTTGCATGTGCCACGCCATCAAGAGGCTCTTCTGTGGCATGGGGGTGAACCCCACCGTGCACGAGTTGGACGAGGATCCTCGAGGAAAGGACCTCGAACGAGCCTTGATGAGGTTACTAGGTTCACCCTCTGTTGTTCCTGTCGTCTTCATTGGCGGCAAGCTTGTCGGAACCATGGACAGAGTCATGGCCTGTCACATCAATGGCACCCTGGTCCCTCTCCTCAAAGAAGCTGGTGCTCTCTGGCTCTAG 381 0.5643 MHYQAAASWGSYVTPRNAVVGDPLERIERLASENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVHELDEDPRGKDLERALMRLLGSPSVVPVVFIGGKLVGTMDRVMACHINGTLVPLLKEAGALWL* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00544 126 Gene3D Glutaredoxin 21 125 - -
Lapu1g00544 126 PANTHER GLUTAREDOXIN 25 126 IPR011905 -
Lapu1g00544 126 FunFam Glutaredoxin family protein 24 125 - -
Lapu1g00544 126 Pfam Glutaredoxin 36 99 IPR002109 -
Lapu1g00544 126 NCBIfam glutaredoxin-like family 27 126 IPR011905 -
Lapu1g00544 126 CDD GRX_GRXh_1_2_like 35 117 - -
Lapu1g00544 126 SUPERFAMILY Thioredoxin-like 24 125 IPR036249 -
Lapu1g00544 126 ProSiteProfiles Glutaredoxin domain profile. 24 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00544 Lapu-Chr1 17392661 17393433 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00544 1 126 Miscellaneous Gene Families AT3G02000 64.234 7.36e-50 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00544 K03676 - gmx:100818026 238.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00544 1 17392661 17393433 Lapu1g00544 1 17392661 17393433 ECH