Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00543 ATGGGTAGCACATTTAATCCACAAATTTTAGTGGAAAAACTAGCCAAGCTGAATAGTTCACAAACGAGTATAGAGACTTTGTCACATTGGTGTATTTTTCATATGAACAAAGCCAAACAAGTTGTTGAAACGTGGGATAGACAATTTCATGGTTCTCCACGTGAGAAGAGATTGGCATTTCTGTATCTTGCAAATGATATTTTACAGAACAGCAGGAGAAAAGGTTCTGAATTTGTGGGTGAATTCTGGAAGGTTCTTCCTGATGCTCTACGAGATGTGATTCAAAATGGGGATGATTTGGCTAGGAATGCGGCACTTCGACTGATTTTTATATGGGAAGAGAGGAAAGTCTTTGGTTCTCGTGGTCAAATTCTTAAGGACGAGTTTGTTGGGAGGAATGTGGAAAACACTAGCAGAGATGTGAAGCCTACAAACATGAAACTGCCATTGCAGAGGCCATCTGCTGGGAATGCATTGGAGAAAATAGTTTCAGCTTTTCATGTTGTTTATGGAGGGCAAAAGGACGAAGATGCCATATTGAGCAAATGCAGGAACGCTATTAACTGTCTTGATAAAGCAGATAAAGAAATAGTTTCAGGGCAAATTGGTGGATCGGCACTGGTGGATGAGCTCCAGGGGCATAATGCTGTACTGAAGGACTGCATTGAGCAGTTAACAGCCATAGAGTCATCTAGAACTAGTCTTGTGTCTCACTTGAGAGAAGCTCTTGAAGATCAGGAATTCAAGCTGGGTCAAGTCCGTAGCCAGATTCAGGCTGCAAATGTTCGGTCTGATCGGGCGACTAACAACTGCCAACAGTTACTTAATGGCAATAACATTCAGTCATTAGGTGAGCAGAGCTCAAAGGAAAATCAGACCTCCATGTCATCTGCAAGTTTTAGTATTTCTAGTGAAAGGGAGCAATCTGCTCCATTAATGTACACACCACAAGTGTCATTTTCTCAGAAATCTGGACACATTGAGGAAGATCCACGCAAGTCTGCAGCTGCTGCAGTGGCCGCAAAACTGACTGCTTCAACATCCTCCGCGCAGATGCTATCGTATGTGCTGTCCTCCCTAGCATCAGAAGGTGTCATAGGCAATCAGTCCTCAGCTGATTATCACTCTGAGAAGAGGACCAAGCTCGAGAACGACCAGCCATCTTTTATGCCGTCTCAGAATCCTCAACAACCACTTCCTCCCTTTTCTCTTCCAGAGTCTATTCAACACAATGCTCCCACAACCAACCAGCAATCTACTCCCAATGAACCACCACCTCCACCCTCATCTTCACCTCCTCCGTTGCCACCACCACCACCACCACCAATGTCACAGTACCCTGTGCCGCAGTTCATGCAGACTGCTGGATCCATTAGTAGTATGGCATACAGCTATGGCATGACACAACAGCCGTCAATGGCAGCGTATCCAGGTGTCGGTGCTTCCCTGAATGGTGTTTCCACTTTTACCCCTCCTCCAATGGGTACATATCAGGGTTTTCAGGGTTCTGATGGAAATTACTATAACCAGCCCTCATCGATGCCTATGGCCCCAATATCTCGACAATAA 1569 0.45 MGSTFNPQILVEKLAKLNSSQTSIETLSHWCIFHMNKAKQVVETWDRQFHGSPREKRLAFLYLANDILQNSRRKGSEFVGEFWKVLPDALRDVIQNGDDLARNAALRLIFIWEERKVFGSRGQILKDEFVGRNVENTSRDVKPTNMKLPLQRPSAGNALEKIVSAFHVVYGGQKDEDAILSKCRNAINCLDKADKEIVSGQIGGSALVDELQGHNAVLKDCIEQLTAIESSRTSLVSHLREALEDQEFKLGQVRSQIQAANVRSDRATNNCQQLLNGNNIQSLGEQSSKENQTSMSSASFSISSEREQSAPLMYTPQVSFSQKSGHIEEDPRKSAAAAVAAKLTASTSSAQMLSYVLSSLASEGVIGNQSSADYHSEKRTKLENDQPSFMPSQNPQQPLPPFSLPESIQHNAPTTNQQSTPNEPPPPPSSSPPPLPPPPPPPMSQYPVPQFMQTAGSISSMAYSYGMTQQPSMAAYPGVGASLNGVSTFTPPPMGTYQGFQGSDGNYYNQPSSMPMAPISRQ* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00543 522 SMART 558neu5 9 130 IPR006569 -
Lapu1g00543 522 Gene3D - 2 129 IPR008942 -
Lapu1g00543 522 MobiDBLite consensus disorder prediction 285 308 - -
Lapu1g00543 522 ProSiteProfiles CID domain profile. 2 134 IPR006569 -
Lapu1g00543 522 Pfam CID domain 9 120 IPR006569 -
Lapu1g00543 522 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN 1 493 - -
Lapu1g00543 522 MobiDBLite consensus disorder prediction 370 452 - -
Lapu1g00543 522 MobiDBLite consensus disorder prediction 471 522 - -
Lapu1g00543 522 MobiDBLite consensus disorder prediction 419 447 - -
Lapu1g00543 522 MobiDBLite consensus disorder prediction 403 418 - -
Lapu1g00543 522 SUPERFAMILY ENTH/VHS domain 11 117 IPR008942 -
Lapu1g00543 522 CDD CID_RPRD_like 7 121 - -
Lapu1g00543 522 MobiDBLite consensus disorder prediction 483 522 - -
Lapu1g00543 522 FunFam ENTH/VHS family protein isoform 1 2 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00543 Lapu-Chr1 17353540 17372283 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00543 K15559 - gmx:100806108 879.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00543 1 17353540 17372283 Lapu1g00543 1 17353540 17372283 ECH