Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00534 ATGAAGTCCTCTCTCAGCAAGTTGAAGAAAATTGCACTTCACAAGACCGTTTCCAAGGACAAAAGGGACTTTCACCCCACCGTTAAGTTCGACGAGCTCGCTCTTGCTGCCAAGGACATGCAAGATATGAGAGATTGCTATGATAGCCTGCTTTCTGCGGCTGCTGCTACACAAAACAGTGCTTACGAGTTTGCTGAGTCGCTGCAGGAAATGGGTACTTGTCTTTTGGAGAAAACAGCCTTAAATGATGATGAAGAAAGTGGTAAAGTTTTGGGGATGCTTGGAAGTGTGCAGCTTGAACTTCAGAAGCTTGTTGATAGCTATCGCTCTCACATTGTACTGACAATAACCAATCCATCTGAGTCTCTTCTTAATGAACTAAGAACTGTTGAGGACATGAAGCGACAATGTGACGAAAAAAGAGATGTTTATGAATACATGATTGCCCAACAGAAAGAGAAAGGAAAGTCAAAGAGTGGTAAAGGTGAAAGTATCACCTTACAGCAGTTGCAAGCAGCTCATGATGACTATGAAGAAGAAGCAACACTCTGTGCCTTTCGATTAAAATCACTGAAGCAAGGCCAGTCACGCAGTCTCCTAACACAGGCAGCGCGTCACCATGCTGCTCAGTTGAATTTCTTTCGGAAAGGACTTAAATCACTAGAAGCGGTTGAGCCACATGTCAGGATGGTTGCTGAACGACAACATATTGATTATCAATTCAGTGGCCTTGAGGATGATGTCGGTGAAGATGGTAATAATGATGACAGTACAGATTTTGACGTCATTGAAGGTGGTGAGCTGAGTTTTGATTACAGATCAAATAAGCAAGGGCCATATATTGTTTCCACATCACCAAACTCAGCAGAGGTGGAAGAATCAGGTCGTTCTTATGTTCGAGCTTCAACCCCAGAAACTGCAGAGACAAGTCTAGACAAGAACCAAGGGGATTTTAAAGTTTCAAATAGAGCCGGCAGTTATTCAGCTCCAATATTTGCCGAAAAGAAATTTGACCCTGCTGAAAGAGTAAGACAACTTATAGCATCATCTACAGCAAAGTCTAATGCATATGTTCTTCCTACACCGGTTAACATCAAAGAAACCAAAAGTAGCTCAGCCCCTCGCACAAGTGCAAGTGGATCTTTGCACAATTTGTGGCATTCGTCCCCTCTAGATGAAAAAAAGAATGAGAAAGATATTGATAGTAAATTGTCAGAACCAACTATCCATAGAGCGCACTCTGTTCTCAGAGAAAGTAACAGTGATACATCCACCCAGTTACCACGCCCTTCAGCAGATGGACTGTCACTTCCACAAGTTGATCTTTTCAATGCCTCTGATACTAAGAAAATAAAGATACAAGCTTTTTCTGGTCCATTGAGTAATAAACCATTGTCAGTAAAACCTATTTCTGGGGGTTTTCCACGTTTACATGTGCCACAGCCTTCATCTCCAAAAGCATCTCCCAATGCTTCACCTCCCCTTGTTTCTTCACCCAGGATAAGTGAGCTTCATGAACTTCCTAGACCTCCTGGTAGTAAGCCTGTGAAATCTTCTCGAGTGGGTCACTCTGCCCCATTAGTATTTAAAAATCCAGAGGTTGCTGTGGCTAATAAATTTCCTTCAGTTATATCCAGTGTAGCATCTCCTCTCCCAACTCCACCTATAGTCTCTCGGAGTTTTTCTATACCTTCCAGTGGTCAGAGAGCTATGACGTTAAATGTTTCTAATACTAAGTATTTGGATAGCCCCCAAGTTTCAAAGGTTGATAAAGCTCCATCACCTCCACTCACACCCATTTCTCAGAGAGTCTCTAGTATACCTGATTTGGCTTCTCACTCTAGTGAAATCCAAGTGGATGCAGGTGGGAGCTAA 1875 0.4261 MKSSLSKLKKIALHKTVSKDKRDFHPTVKFDELALAAKDMQDMRDCYDSLLSAAAATQNSAYEFAESLQEMGTCLLEKTALNDDEESGKVLGMLGSVQLELQKLVDSYRSHIVLTITNPSESLLNELRTVEDMKRQCDEKRDVYEYMIAQQKEKGKSKSGKGESITLQQLQAAHDDYEEEATLCAFRLKSLKQGQSRSLLTQAARHHAAQLNFFRKGLKSLEAVEPHVRMVAERQHIDYQFSGLEDDVGEDGNNDDSTDFDVIEGGELSFDYRSNKQGPYIVSTSPNSAEVEESGRSYVRASTPETAETSLDKNQGDFKVSNRAGSYSAPIFAEKKFDPAERVRQLIASSTAKSNAYVLPTPVNIKETKSSSAPRTSASGSLHNLWHSSPLDEKKNEKDIDSKLSEPTIHRAHSVLRESNSDTSTQLPRPSADGLSLPQVDLFNASDTKKIKIQAFSGPLSNKPLSVKPISGGFPRLHVPQPSSPKASPNASPPLVSSPRISELHELPRPPGSKPVKSSRVGHSAPLVFKNPEVAVANKFPSVISSVASPLPTPPIVSRSFSIPSSGQRAMTLNVSNTKYLDSPQVSKVDKAPSPPLTPISQRVSSIPDLASHSSEIQVDAGGS* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00534 624 MobiDBLite consensus disorder prediction 598 624 - -
Lapu1g00534 624 MobiDBLite consensus disorder prediction 388 417 - -
Lapu1g00534 624 Gene3D Arfaptin homology (AH) domain/BAR domain 31 242 IPR027267 -
Lapu1g00534 624 MobiDBLite consensus disorder prediction 367 386 - -
Lapu1g00534 624 CDD BAR 39 227 - -
Lapu1g00534 624 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 1 614 IPR037488 -
Lapu1g00534 624 MobiDBLite consensus disorder prediction 584 624 - -
Lapu1g00534 624 MobiDBLite consensus disorder prediction 462 498 - -
Lapu1g00534 624 MobiDBLite consensus disorder prediction 418 432 - -
Lapu1g00534 624 MobiDBLite consensus disorder prediction 367 438 - -
Lapu1g00534 624 SUPERFAMILY BAR/IMD domain-like 31 229 IPR027267 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00534 Lapu-Chr1 17122005 17129755 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00534 - - gmx:100775799 1050.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00534 1 17122005 17129755 Lapu1g00534 1 17122005 17129755 ECH