Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00528 ATGGGGTGCACTTACTCTGTGTATAGGAAGAAAAAAGCAAACTTTCCTGAAGTGGTGGTGTTTGTTCCATCAACAAGAATTCCGGTGCAATCTGATCTTCAAAGGGTGCTTAAGGGGGTAGTTCCTCGGGATCTTGCTGATAAATTGACTTCACTAAGGAATCAGATAGTGTTGGTAGCAGAGGATACTGGTGGATCAGCCATAACTGAATTGCGGCGAGCTTTGAATGAATACTTGTCTCTTCTGATTGGACTAACGAAGAAAGAGTATGGTCTTGAAGGACTGATAGATTTTAAATGGAAACATTTAGAAGATGGGAAACAACAGGATAGCAGTATAGCAAATTCCTGGTTTGAGGTGCTGTCTGCAGTTCATCTTATGGCTATGCTGACACTCTCTGACGCTGACTCACTGATGATTCCAAAGGACTCGTCAGGCTCTGGATTCAGGGTTGTATCTTCAGATAGCAAGAGGGAAGCAATTGATTTGTTGCTCAAGGCCTCAGGATATCTGGAGTTCTGTTTAAGGGATATTCTTACTCGGATACCTCCTGAAATCAGGAATACTTTTCCCCACGACTTGCAGGAGGGTGTATTGGAGGCTATTGCTATTCAAACACTAGGCCAGGGAACTGAGATTCAACTTGGTCTTGCGGTGGAATGTCAGAAGGCAACTTTGTCTGTGAAGAGGAGACTGGCATGTGAGCAGCTGATATACTTTACTCAGGCTTATCACTGTTTGTCAGGATGCGACACCAACCAAGGGCGTGGAAGGAAGCATCTCCGATTCATCAAATGGAAATTTCTTGAAGCCAAGGCTGCAGCCTACTACTACCATGGTCTGATCCTTGACAAAGGTAATGAACCAAACAATCCCATTGGTGCTGTATCTTGTTTTCTTGCTGCAGAAGAGCTTCTGACTGAAAGCAAGAAGGCCAGCTTAAGCTTTTGCCTTGCAGCTCCAGTTACAAGGGTTCCTCCGCTCTGGGGTGCTATGAAATTTTTACACCAGAAAATTCCTGAAGTTGCATCAAGGAAGTCGCAGATGTATGGCTACCTCTGGGAGCAAGAGAAGGGTCTCCAATCATTGCCAGACCTTCCTGAGTTCCAATTATCATTACGTCCAGATGACTATGAACTGCCTGAAATTGATCCAGCATGGGATACTAGAAACTGGGAGTCACTAGGACAGCCATTGAAGGAGCACCTTATAGATAGTGATGAGAATCCAACTGATTGA 1239 0.4455 MGCTYSVYRKKKANFPEVVVFVPSTRIPVQSDLQRVLKGVVPRDLADKLTSLRNQIVLVAEDTGGSAITELRRALNEYLSLLIGLTKKEYGLEGLIDFKWKHLEDGKQQDSSIANSWFEVLSAVHLMAMLTLSDADSLMIPKDSSGSGFRVVSSDSKREAIDLLLKASGYLEFCLRDILTRIPPEIRNTFPHDLQEGVLEAIAIQTLGQGTEIQLGLAVECQKATLSVKRRLACEQLIYFTQAYHCLSGCDTNQGRGRKHLRFIKWKFLEAKAAAYYYHGLILDKGNEPNNPIGAVSCFLAAEELLTESKKASLSFCLAAPVTRVPPLWGAMKFLHQKIPEVASRKSQMYGYLWEQEKGLQSLPDLPEFQLSLRPDDYELPEIDPAWDTRNWESLGQPLKEHLIDSDENPTD* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00528 412 SMART BRO1_2 19 383 IPR004328 -
Lapu1g00528 412 CDD BRO1_Alix_like 11 376 - -
Lapu1g00528 412 Gene3D alix/aip1 like domains 29 396 IPR038499 -
Lapu1g00528 412 PANTHER UNCHARACTERIZED 1 394 IPR038898 -
Lapu1g00528 412 ProSiteProfiles BRO1 domain profile. 15 412 IPR004328 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00528 Lapu-Chr1 16968566 16971808 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00528 - - gmx:100786306 746.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00528 1 16968566 16971808 Lapu1g00528 1 16968566 16971808 ECH