Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00515 ATGAGCAGTTGGAAAAACCTTCTTCTACGAATCGGGGACAAGAGTCCCGAATATGGAGTCTCCTCTGACTACAAAGATCACATTGATACGTGCTTTGGCGCCCTTCGCCGCGAATTCGACCACTCCCAAACCGATGTTTTGGAGTTCCTTCTCACATGTGCTGAGCATTTGTCTCACAAGATTCCTCTGTATGGAACCCTGATTGGCTTAATTAACTTGGAAAATGAGGACTTTGGGAAACAACTAGTGGAGAAAACTCAAAGTATGTTCCAGGATGCCTTAGATACTGGAAACTGCAATGGGGTTCGTGTTCTACTGCGGCTTTTGACTGTTATGATGTGCAGTAAGGTTCTTCAACCAAGCTCTTTGGTGGCTGTCTTTGAAACATTTTTATCCTCAGCTGCCACAACAGTAGATGAGGAAAAAGGAAATCCCTTATGGCAGCCATGTGCAGACTTTTACATAACATGCATTTTATCATGCCTCCCATGGGGTGGAGCAGAACTTTTTGAGCAAGTTCCTGAAGATATTGATAGAGTGATGGTTGGTGTAGAAGCTTACTTGAGCATCAGAAAGCATACATCTGATGCTGGCTTATCCTTTTTCGAAAATGATGATGAAAATGGGGAAGGTCATAGTGACAAGGATTTTTTAGAAGATTTATGGGATAGAATACAGGTTTTATCAAGCAATGGATGGAAAGTTGAAAGTGTTCCAAGACCTCATCTTTCATTTGAAGCTCAGCTGGTTGCTGGCAAGTCTCATGAATTTGGACCAATAAGCTGCCCCAGCTTACCAAAACCACCTTCAGTCCCTTCTGGCGTTGCTATTGGTAAACAGAAGCATGAAGCAGAATTAAAATACCCTCAAAGGATACACCGGTTAAACATATTTCCTCCCAGTAAAAATGAGGATCTACAACCTATAGACAGATTTGTTATGGAAGAGTATCTCCTAGATGTGCTTCTGTTCTTCAATGGCTGTCGAAAGGAATGTGCCTCTTTCATGGTTGGTCTGCCAGTTTCCTTCAGATATGAGTATCTTATGGCCGAGACGATATTCTCTCAGCTGCTGATGCTACCTCAACCACCTTTCAGACCAGTATATTACACACTTGTTATTATTGACCTTTGCAAGGCTCTTCCTGGAGCTTTCCCTGCAGTTGTAGCTGGAGCAGTTCGAACTCTCTTTGAGAGGATTGCTGATTTGGATATGGAATGTCGAACACGTCTAATCCTTTGGTTCTCACATCATTTATCAAACTTCCAGTTCATCTGGCCATGGGAAGAGTGGGCTTATGTCTTAGACCTTCCAAGGTGGGCTCCACAGCGTGTCTTTGTCCAGGAGGTTTTGGAGAGGGAAGTTCGCTTGTCATACTGGGACAAAGTTAAGCAGAGTATTGAAAACGCACCTCGTTTGGAAGAATTGCTTCCTCCAAAGAGTGGGCCGAACTTTAGTTTTGGTGCAGAAGATGGTAAAGAAAGCAATGAGCATGCACTGTCTGGAAAGCTCAACAACATGGTTAAAGGGAAGTCACCTGTTCGTGAAATAATTTCATGGATTGATGAAAGTGTGTTTCCAAATAATGGTCTAGAAGTTACTCTCAAAGTAGTTGTTCAAACTCTTCTCAATATTGGATCCAAGAGTTTCACTCATTTGATAACTGTCTTGGAGAGATATGCGCAAGTCTTTGCAAAAGTATGTCCTGACGAGGATCGGCAAGTCATGCTGATAACTGAAGTGAGTTCTTTCTGGAAGAATAACACCCAAATGACAGCAATAGCTATTGACAGGATGATGGGTTATAGACTTGTATCAAATCTGGCTATTGTGAGATGGGTCTTCTCAGCAGAAAATATTGAACAATTTCATACATCGGATCGTCCATGGGAGATTCTTAGAAATGCAGTAAGCAAGACACACAATCGTATTTCTGATCTACGGAAAGAAATATTAACTATTAAAAAGAACATTTCATCAGCTGAAGAAGCTGCCAAGGAGGCTAAAGCAGAGTTAGATGCTGCAGAGTCGAAACTTACTCTTGTGGATGGTGAACCAGTTCTTGGCGACAATCCTGTTAGATTGAATAGATTGAAATCACATGCTGAAAAAACAAAGGAGGACGTGGTGACTCTTGAAGAATCTTTAGAATCTAAAGAAGCTCTTCTTGCCCGAGCAATTGAGGAAAATGAGGCACTGTTTCTCTTGTTGTACAAAAGCTTCTCAAATGTGTTGACAGAGCGCCTTCCTGAAGGAACTAGAACACTGCATGAGTTGAAGTCTGCACAAGTAGATGTGATGGCAGTGGACACTGAAGAGCCACCACCAATGGAAGTAGATGACGAAAACCAGAGATCTCAAAACAGTCAGTCAAATGGAGAGAAGAAAAGTGGTGCTTATACTGTAGGTGAAAAGGAGCAGTGGTGTATCACCACTTTGGGCTATGTGAAGGCTTTTTCTAGGCAGTATGCCGCTGAGATATGGCCCCATGTTGAAAAGTTGGATGCAGAGGTATTGACAGAAGAAACACCTTCTCTTTTTCGGTCAGCTGTTTATGCCGGTCTTCGAAGACCAATTCACGAGGCTTGA 2589 0.4241 MSSWKNLLLRIGDKSPEYGVSSDYKDHIDTCFGALRREFDHSQTDVLEFLLTCAEHLSHKIPLYGTLIGLINLENEDFGKQLVEKTQSMFQDALDTGNCNGVRVLLRLLTVMMCSKVLQPSSLVAVFETFLSSAATTVDEEKGNPLWQPCADFYITCILSCLPWGGAELFEQVPEDIDRVMVGVEAYLSIRKHTSDAGLSFFENDDENGEGHSDKDFLEDLWDRIQVLSSNGWKVESVPRPHLSFEAQLVAGKSHEFGPISCPSLPKPPSVPSGVAIGKQKHEAELKYPQRIHRLNIFPPSKNEDLQPIDRFVMEEYLLDVLLFFNGCRKECASFMVGLPVSFRYEYLMAETIFSQLLMLPQPPFRPVYYTLVIIDLCKALPGAFPAVVAGAVRTLFERIADLDMECRTRLILWFSHHLSNFQFIWPWEEWAYVLDLPRWAPQRVFVQEVLEREVRLSYWDKVKQSIENAPRLEELLPPKSGPNFSFGAEDGKESNEHALSGKLNNMVKGKSPVREIISWIDESVFPNNGLEVTLKVVVQTLLNIGSKSFTHLITVLERYAQVFAKVCPDEDRQVMLITEVSSFWKNNTQMTAIAIDRMMGYRLVSNLAIVRWVFSAENIEQFHTSDRPWEILRNAVSKTHNRISDLRKEILTIKKNISSAEEAAKEAKAELDAAESKLTLVDGEPVLGDNPVRLNRLKSHAEKTKEDVVTLEESLESKEALLARAIEENEALFLLLYKSFSNVLTERLPEGTRTLHELKSAQVDVMAVDTEEPPPMEVDDENQRSQNSQSNGEKKSGAYTVGEKEQWCITTLGYVKAFSRQYAAEIWPHVEKLDAEVLTEETPSLFRSAVYAGLRRPIHEA* 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00515 862 Coils Coil 695 729 - -
Lapu1g00515 862 Gene3D - 490 851 - -
Lapu1g00515 862 MobiDBLite consensus disorder prediction 773 799 - -
Lapu1g00515 862 MobiDBLite consensus disorder prediction 781 797 - -
Lapu1g00515 862 Pfam MIF4G like 498 826 IPR015174 GO:0016070
Lapu1g00515 862 SUPERFAMILY ARM repeat 478 848 IPR016024 -
Lapu1g00515 862 SUPERFAMILY ARM repeat 2 296 IPR016024 -
Lapu1g00515 862 FunFam Nuclear cap-binding protein subunit 1 3 269 - -
Lapu1g00515 862 SMART if4_15 8 229 IPR003890 GO:0003723|GO:0005515
Lapu1g00515 862 SUPERFAMILY ARM repeat 294 478 IPR016024 -
Lapu1g00515 862 Coils Coil 644 685 - -
Lapu1g00515 862 Gene3D - 3 269 - -
Lapu1g00515 862 Gene3D - 299 481 - -
Lapu1g00515 862 PANTHER CAP BINDING PROTEIN 3 856 IPR027159 GO:0000339|GO:0005846|GO:0006406
Lapu1g00515 862 Pfam MIF4G domain 21 221 IPR003890 GO:0003723|GO:0005515
Lapu1g00515 862 FunFam Nuclear cap-binding protein 296 481 - -
Lapu1g00515 862 Pfam MIF4G like 343 467 IPR015172 GO:0016070
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00515 K12882 - gmx:100811738 1563.13