Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00512 ATGCTCAGAACATTACCCAGGGTGTTCAAGCACACCACCCTTGCCAATGATTTGCTTCAAAACCGCAGCAGATTCTATGCAACAACGGTTGGTGGAAGAAGGCTAGAGGGAAAAGTGGCACTCATAACAGGCTCCGCAAGTGGACTTGGCAAGGCCACGGCCCATGAATTTGTCCACCATGGGGCCCAAGTCATCATTGCTGACAATGACTCCATGCTTGGCCCACAAGTTGCAGAAGAGTTGGGCCCGTCAGCCCGTTATGTGGAATGTGATGTTGCTGTGGAGACCCAAGTTGCAGAGGCTGTGAATGTTGCCATGGCCCACTACGGCAAGCTTGACATCATGTACAACAATGCTGGCATCCCAGGCCCATCAATTCCTCCAAGCATAGCAGATCTAGACCTTGATGAGTTTGACAAAGTCATGAGGATCAACATAAGGGGAATGATTGCTGGTATAAAGCATGCAGCCCGGGTCATGATACCCATGGGCTCAGGCTCCATTCTATGCACATCAAGCATAAGTGGGGTAATGGGTGGGCTTGGGCCTCATCCTTATACAATATCAAAGTTTACAATACCTGGGGTAGTAAAATCTGTGGCTAGTGAGTTATGCAATGTTGGGGTGAGGATCAATTGCATATCCCCAGCTCCAATTCCTACACCTATGGTTTTGGCTCAAATACAAAACTTTTATCCTGGTTTTACCCAAGAACAGATAGAGGGTGTTGTGAATGGGTTTCTTGGGCTCAAAGGTGCTAAGTGTGAGGACATTGATGTGGCAAGGGCTGCATTGTACTTGGCATCAGATGAAGCAAAGTTTATCTCAGGTCACAATCTCATAGTTGATGGAGGCTTCACCAGCTTTAAAACTCTCACATTCCCTTCTCCAAATCAAACTGCTTAA 906 0.4724 MLRTLPRVFKHTTLANDLLQNRSRFYATTVGGRRLEGKVALITGSASGLGKATAHEFVHHGAQVIIADNDSMLGPQVAEELGPSARYVECDVAVETQVAEAVNVAMAHYGKLDIMYNNAGIPGPSIPPSIADLDLDEFDKVMRINIRGMIAGIKHAARVMIPMGSGSILCTSSISGVMGGLGPHPYTISKFTIPGVVKSVASELCNVGVRINCISPAPIPTPMVLAQIQNFYPGFTQEQIEGVVNGFLGLKGAKCEDIDVARAALYLASDEAKFISGHNLIVDGGFTSFKTLTFPSPNQTA* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00512 301 FunFam Short-chain dehydrogenase reductase 25 292 - -
Lapu1g00512 301 Gene3D - 27 294 - -
Lapu1g00512 301 PRINTS Glucose/ribitol dehydrogenase family signature 207 224 IPR002347 -
Lapu1g00512 301 PRINTS Glucose/ribitol dehydrogenase family signature 110 121 IPR002347 -
Lapu1g00512 301 PRINTS Glucose/ribitol dehydrogenase family signature 186 205 IPR002347 -
Lapu1g00512 301 PRINTS Glucose/ribitol dehydrogenase family signature 250 270 IPR002347 -
Lapu1g00512 301 PRINTS Glucose/ribitol dehydrogenase family signature 39 56 IPR002347 -
Lapu1g00512 301 PRINTS Glucose/ribitol dehydrogenase family signature 160 176 IPR002347 -
Lapu1g00512 301 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 110 121 IPR002347 -
Lapu1g00512 301 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 174 IPR002347 -
Lapu1g00512 301 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 186 205 IPR002347 -
Lapu1g00512 301 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 33 290 - -
Lapu1g00512 301 Pfam Enoyl-(Acyl carrier protein) reductase 44 287 - -
Lapu1g00512 301 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 36 287 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00512 Lapu-Chr1 16649015 16651772 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00512 35 287 Acyl Lipid Metabolism Gene Families AT1G63380 30.038 8.54e-25 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00512 - - gmx:100808525 526.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00512 1 16649015 16651772 Lapu1g00512 1 16649015 16651772 ECH