Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00507 ATGAGGCAGCACAAGCAGGTTTCAGCCCTTAACCGGCGACCCACGGTCCTTTATCTGGTGTGCGCCGCTGCGTTGTTCTCTCTCCTCCTCTTCTACATCCAATCCTCTTTCTTCGCAGGGTCCGTCTCTTCGGATCACAACTCCGAAATTATCCGCGTCTTGTCTAACTTTCAGTCCAGTGTTCAGCAATGTGTGGATAACAGGGGGCTAGGACTCACTGCTCATATTATTGATCATTGTAAATTGATCCTTAAATACCCTGAAGGTACCAACAGCACTTGGTACAACGCACAGTTTAAGAAATTTGAGCCGTTGGAGTACAGTTATGATGTGTGCGAGACAATCCTGTTGTGGGAACAGTATCGGAACATGACAACTGTGTTGACCAGAGAGTATCTTGATTCTCGACCTGGTGGTTGGATGGATTACGCTCCACAAAGGATAGCACAGTTGGGGACAAAGAAGTGCACCAACAAGACTCTTTGTGAAGAAAACCTCAATGTGTTATTACCTGCAAAGCCCCCATTTCACCCACGGCAGTTTCGAACTTGTGCTGTTGTTGGGAATTCTGGGGACCTTCTGAAGACTACATTCGGGGAAGAAATTGATAGACATGATGCTGTTTTTCGAGACAATGAGGCCCCTGTTAATGAGAAATATGCCAAATATGTTGGTCTTAAGAGGGATTTCCGTCTAGTTGTTCGAGGTGCTGCTCGTAACATGGTCCCTATTCTGAACGGATCTGACAATGAGGTTCTCATAATCAAAAGTCTGACGCACAGAGAAATCAATGCAGTTATAAAGACCATACCCAATCCAGTCTATCTCTTCCAAGGAATTGTACTTCGTCGAGGTGCCAAAGGAACTGGAATGAAATCTATTGAGTTAGCGCTCTCAATGTGTGATATTATTGATATATATGGATTCACTGTTGATCCAGGATACACTGAATGGACAAGATACTTCTCTAAGCCCAGGACTGGACACAATCCACTTCAAGGAAGAGCATATTACCAACTTCTAGAATGTCTTGGGGTTATACGGATTCACTCCCCCATGAGATCTAAGAGGAGGGAAGACTGGTCAGATATACCTAGTAGGGAAATGATAAGCCAAGCTCATGCTGCTGCTTTGCGCTTGAAAAGGAATCAGGCCGGTCAGAGAGGTGATTTAGGGCAGTTTGGCAATTGTAAGGTGTGGGGCAATGTGGATCCAGAGAACAGTGGACCCGTCTCAGGATCACCAGACATGAGTGATGTCAGGAAATATTCGAATTATAACAAATGGGAAGTCATGCCTTTTGAGAGTTTGAGGAGGGAAGCACAGGATCATTATAACCAGATGCAAGGGGTGTCTCTATATAAAATGGATGGCAATAGGTTGGATGATCTAGTCTGTGTGAGACATTCCTTAAAATCTGAGGCGGCAGCTGACATAGCTTCCGAACAGCATTCTGTTTCTTCGCTTATAGCAGCTGTCAGAGCGTAG 1488 0.4503 MRQHKQVSALNRRPTVLYLVCAAALFSLLLFYIQSSFFAGSVSSDHNSEIIRVLSNFQSSVQQCVDNRGLGLTAHIIDHCKLILKYPEGTNSTWYNAQFKKFEPLEYSYDVCETILLWEQYRNMTTVLTREYLDSRPGGWMDYAPQRIAQLGTKKCTNKTLCEENLNVLLPAKPPFHPRQFRTCAVVGNSGDLLKTTFGEEIDRHDAVFRDNEAPVNEKYAKYVGLKRDFRLVVRGAARNMVPILNGSDNEVLIIKSLTHREINAVIKTIPNPVYLFQGIVLRRGAKGTGMKSIELALSMCDIIDIYGFTVDPGYTEWTRYFSKPRTGHNPLQGRAYYQLLECLGVIRIHSPMRSKRREDWSDIPSREMISQAHAAALRLKRNQAGQRGDLGQFGNCKVWGNVDPENSGPVSGSPDMSDVRKYSNYNKWEVMPFESLRREAQDHYNQMQGVSLYKMDGNRLDDLVCVRHSLKSEAAADIASEQHSVSSLIAAVRA* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00507 495 Pfam Glycosyltransferase family 29 (sialyltransferase) 164 240 IPR001675 GO:0006486|GO:0008373
Lapu1g00507 495 Gene3D Glycosyl transferase family 29 142 275 IPR038578 -
Lapu1g00507 495 Gene3D Glycosyl transferase family 29 277 352 IPR038578 -
Lapu1g00507 495 PANTHER SIALYLTRANSFERASE-LIKE PROTEIN 1 1 474 IPR044782 GO:0008373|GO:0009846|GO:0009860
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00507 Lapu-Chr1 16594970 16614473 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00507 67 346 Glycosyltransferase AT1G08660 86.786 0.0 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00507 - - vra:106759327 913.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00507 1 16594970 16614473 Lapu1g00507 1 16594970 16614473 ECH