Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00496 ATGGCGCACTTGCAAGAAGTTGATCGAAGCAAGGGTGAATTCATCCGTTTAGAGCGCGAATCTGTCATTCCAATTCTAAAGCCTAAGCTCATAATGACACTGGCCAATCTTATTGAACATAGTTCTGACCGGACTGAATTTTTGAAGCTCTCCAAGAGAATAGAGTACACAATTCGAGCTTGGTACCTTCTACAATTTGAGGACTTGATGCAACTTTACTCCCTCTTTGACCCTGTACACGGAGCCCAAAAGTTGGAACAACAGAAGTTATCTTCCGAAGAAATTGATGTGCTTGAACAGAATTTCTTGACTTACCTTTTTCAGGTCATGGAAAAGAGCAACTTCAAGATAGTGACTGATGATGAGATTGATGTTGCACATTCTGGCCAATATCTTCTAAATCTTCCCATTACTGTTGATGAGTCTAAGCTTGACAAGTCACTTCTGAAGAAATATTTTGAAGAGCATCATCATGATGACCTTCCAGATTTTTCTGATAAGTATGTTATCTTTCGGCGTGGCATTGGAATTGACCGAACAAGTGACTACTTTGTGATGGAGAAAGTGGACATGCTTATTGGACGTTTTTGGGCTTATCTCTTGAGGTTAACTAGATTGGAAAAGCTTTTATCAAGAAGGTCAAAAAGGCGAAATAAGAAAGATCCAAAGGACAATGAAATTAACTCTGAAATAGATGGGCAGGACCTTTATGTTGAGCGGATACGTCTTGAAAATATGCAACTAAGTTGCCGTAATTTGCTGGGAAAGACCTTAATCCAAGAACCAACATTTGATAGGATAATTGTTGTCTACAGGAGAGCCAGATCCAAATCAAAAGATGATCGAGGAATATTTGTGAAGCATTTCAAAAACATTCCAATGGCTGATATGGAAATAGTTCTTCCAGAAAAGAAAAACCCTGGATTAACGCCAATGGATTGGGTCAAGTTTCTTGGATCAGCTATAGTTGGGCTGGTTGCTGTAGTTAGTTCACTTGAAATGCCTTCTGCTGATTGGTGGGTCATCATTGCTGTTCTTTCCACAGTAATTGGTTACTGTGCTAAGACATACTTCACGTTCCAACAAAACATGGCTCAATATCAAAATTTGATTACACAGTCAATGTACGACAAACAACTTGACAGTGGAAAGGGTACACTTCTTCATTTATGTGATGATGTCATTCAACAGGAAGTAAAAGAGGTAATAGTTTCATTCTTTATTCTGATGGAACAGGGCAAAGCTACAAGACAGGATCTTGATCAATGGTGTGAGGAACTAATCAAAGAAGAGTTTGGTGAGGATTGTAATTTTGATGTGGATGATGCTGTTGAGAAATTAGAGAAATTGGGAATTGTTACCCGGGATTCTGTCGGTCGGTATCAATGCGTTGGGCTAAAACGGGCTAACGAAATCATTGGCACCACCACTGAAGAGCTTGTCCTTAAGGCAAGACAGGGAAACATGGCTCCTTGA 1476 0.3963 MAHLQEVDRSKGEFIRLERESVIPILKPKLIMTLANLIEHSSDRTEFLKLSKRIEYTIRAWYLLQFEDLMQLYSLFDPVHGAQKLEQQKLSSEEIDVLEQNFLTYLFQVMEKSNFKIVTDDEIDVAHSGQYLLNLPITVDESKLDKSLLKKYFEEHHHDDLPDFSDKYVIFRRGIGIDRTSDYFVMEKVDMLIGRFWAYLLRLTRLEKLLSRRSKRRNKKDPKDNEINSEIDGQDLYVERIRLENMQLSCRNLLGKTLIQEPTFDRIIVVYRRARSKSKDDRGIFVKHFKNIPMADMEIVLPEKKNPGLTPMDWVKFLGSAIVGLVAVVSSLEMPSADWWVIIAVLSTVIGYCAKTYFTFQQNMAQYQNLITQSMYDKQLDSGKGTLLHLCDDVIQQEVKEVIVSFFILMEQGKATRQDLDQWCEELIKEEFGEDCNFDVDDAVEKLEKLGIVTRDSVGRYQCVGLKRANEIIGTTTEELVLKARQGNMAP* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00496 491 PANTHER AMINOPEPTIDASE (DUF3754) 9 488 - -
Lapu1g00496 491 Pfam Protein of unknown function (DUF3754) 264 385 IPR022227 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00496 Lapu-Chr1 16338153 16353664 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00496 - - gmx:100819645 883.634
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00496 1 16338153 16353664 Lapu1g00496 1 16338153 16353664 ECH
Lapu1g00496 1 16338153 16353664 Lapu4g01033 4 26353066 26363339 PCT