Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00490 ATGGCTGTTTCATATGTTCACATGGTTTCATCTAGTGGGGGTTTTAACAAGAGTAACTTGTCCTATGCCAATTGCAATTATAAGGGGAGGTGGACCCACCGTTTAGTTTTTGCTTCGATGCACACGTCAGACTCCAAGGTAGACTTGTTACTGGACAATGTAAAATGGGATAACAAAGGCTTAGCTGTGGCAATAGCTCAAAATGTTGACACAGGGGCCATATTAATGCAAGGTTTTGCAAATAGAGAAGCAGTTGCTACAACCCTATCTTCTCGAAAGGCCACTTTCTATAGCCGATCACGATCTACATTGTGGACTAAAGGAGAGACCTCTAATAATTTTATCAATGTTCATGATGTCTTTCTTGATTGCGATCGTGATTCTATAATATACCTGGGGAAACCTGATGGGCCTACCTGCCACACAGGGGCAGAAACATGTTATTATACATCAGTCTTTGACTTCTTAAAACAGCAAGAGGATGAAGAAAATAAATTGGCTCTAACCTCTTTGTATGCATTAGAGTCAACAATCTCGAAACGCAAATCAGAGTTAATAGGAGAAAATGAGAAGCCTTCATGGACAAAGCGATTATTGCTTAATGATAAGTTGTTGTGCTCTAAAATCAGGGAAGAGGCAAATGAGTTGTGTGAAACACTAGAAAATAATGAGGACAAGTCGCGTACTGCTTCAGAGATGGCTGATGTACTCTATCATGCCATGGTTCTGTTGGCAAAGAAAGATGTCAAAATAGAAGATGTTTTGCAGGTTCTACGGCTGAGATTTTCCCAATCTGGTATTGAGGAGAAGAGAAGCCGTGTACCCCCTAAGCCATTGGATCATTAA 846 0.4054 MAVSYVHMVSSSGGFNKSNLSYANCNYKGRWTHRLVFASMHTSDSKVDLLLDNVKWDNKGLAVAIAQNVDTGAILMQGFANREAVATTLSSRKATFYSRSRSTLWTKGETSNNFINVHDVFLDCDRDSIIYLGKPDGPTCHTGAETCYYTSVFDFLKQQEDEENKLALTSLYALESTISKRKSELIGENEKPSWTKRLLLNDKLLCSKIREEANELCETLENNEDKSRTASEMADVLYHAMVLLAKKDVKIEDVLQVLRLRFSQSGIEEKRSRVPPKPLDH* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00490 281 Coils Coil 206 230 - -
Lapu1g00490 281 NCBIfam phosphoribosyl-ATP diphosphatase 171 258 IPR008179 GO:0000105|GO:0004636
Lapu1g00490 281 Pfam Phosphoribosyl-ATP pyrophosphohydrolase 189 258 IPR021130 -
Lapu1g00490 281 Hamap Histidine biosynthesis bifunctional protein HisIE [hisI]. 52 263 IPR023019 GO:0000105|GO:0004635|GO:0004636
Lapu1g00490 281 FunFam Histidine biosynthesis bifunctional protein HisIE 46 140 - -
Lapu1g00490 281 SUPERFAMILY HisI-like 50 154 IPR038019 -
Lapu1g00490 281 Gene3D - 42 140 IPR038019 -
Lapu1g00490 281 Gene3D - 168 263 - -
Lapu1g00490 281 SUPERFAMILY all-alpha NTP pyrophosphatases 172 262 - -
Lapu1g00490 281 CDD NTP-PPase_HisIE_like 171 258 IPR008179 GO:0000105|GO:0004636
Lapu1g00490 281 PANTHER HISTIDINE BIOSYNTHESIS BIFUNCTIONAL PROTEIN 41 273 - -
Lapu1g00490 281 Pfam Phosphoribosyl-AMP cyclohydrolase 76 149 IPR002496 GO:0000105|GO:0004635
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00490 Lapu-Chr1 16201209 16209624 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00490 K11755 - gmx:100807276 494.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00490 1 16201209 16209624 Lapu1g00490 1 16201209 16209624 ECH