Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00486 ATGTCGTCTGTGCCAGCACGAACAGGGCGACAAAGACAGCGTTATGAAGACAATTTTCGCCTTGTCTCTGGATGTATTCCCTATAGAAGGAGAAAGGACAACACAGATCTAATGCGAGAAACTGAGATAATAGAAGTACTAATGGTTTCTTCACCAAAACGTGATGACCTTGTATTCCCAAAGGGTGGATGGGAGGATGATGAGACTGTTACTGAAGCTGCTTGCCGCGAAGCTTTAGAGGAAGCAGGAGTTAAAGGAATACTAAGAGAAATTCCATTAGGAATATGGGAGTTTAGAAGCAAAAGCAGTCAAGACCTGTGTAGCATAGAAGGAGGCTGCAGAGGATACATGTTTGCCTTGGAGGTGACTGAAGAACTCGAGACATGGCCAGAGCAGAAAAATCGTGCTCGCCAATGGTTAAACGTAAAAGAGGCATTCAGACTCAGCAGATATGACTGGATGTGTAATGCACTAGAGGCATTTTTGAGAGTCATGGAAGAGGACAGAAAGCTTGATGAGAAGCAAGACCAGAATATTGAACATGAACCACCTTCAATTATAGTAGCAGATGTGCCAGAATGCCAAAGTATGTCACCTAACTGCTATAAAAGATCCTCCACAATGCAGCACCATGGCATGCCTCCTACGGCCAATCTTCTGTCACGAGCTACTCAAGAGATAGCCATCCATTTTGGTTATTGA 702 0.4402 MSSVPARTGRQRQRYEDNFRLVSGCIPYRRRKDNTDLMRETEIIEVLMVSSPKRDDLVFPKGGWEDDETVTEAACREALEEAGVKGILREIPLGIWEFRSKSSQDLCSIEGGCRGYMFALEVTEELETWPEQKNRARQWLNVKEAFRLSRYDWMCNALEAFLRVMEEDRKLDEKQDQNIEHEPPSIIVADVPECQSMSPNCYKRSSTMQHHGMPPTANLLSRATQEIAIHFGY* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00486 233 CDD Nudix_Hydrolase_9 21 154 IPR047198 GO:0016462
Lapu1g00486 233 ProSiteProfiles Nudix hydrolase domain profile. 18 162 IPR000086 -
Lapu1g00486 233 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 5 165 - -
Lapu1g00486 233 ProSitePatterns Nudix box signature. 62 83 IPR020084 GO:0016787
Lapu1g00486 233 FunFam Nudix hydrolase 13 mitochondrial 4 164 - -
Lapu1g00486 233 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 6 167 - -
Lapu1g00486 233 Pfam NUDIX domain 46 153 IPR000086 -
Lapu1g00486 233 SUPERFAMILY Nudix 14 167 IPR015797 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00486 Lapu-Chr1 16087957 16092335 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00486 K07766 - gmx:100794003 427.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00486 1 16087957 16092335 Lapu1g00486 1 16087957 16092335 ECH