Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00480 ATGGCGCTATCCACCGACGCATCACCGCCACCTCCGTTAGGAAACGAACCATTACCTCAAGACGGCGACGGTTACGACGTTAACAATGACGACGTCGCTTCGTTCGGCGTCGTTTCACTGGACGAAGACGGTTTTCCGTCGCAACTCCCCGGATCGGAAACGCCACCTGAAAAGAGCAGTTTCGCCGCCGATTTCTATCGTTGCGGAAGCGATTGGTCCTCGCTGTTGTTGCTGGAAGATAACAATAATAGACACAGCGATTTCGAGGGCAGTTCCGGGAAGAAGATGAAGCAGGCCAACCTGTTCCAGATTTGGGGTTTCAGAAGAAACGACGCCGTTGGTTCAGTTGAATCTAGACCCAGTCTGAGTGGTTATTCTGATGACGGAGGTGGTTCTTCTGAGAGGAAGATTGTGAAGCCCGGAAATTGGGGTTCGATTTTGCGCGACACAGGAAGAGAGTCTGAGAACACGAAATCTGTTCGCAAGAGAAAGGGTTTCAGTGGTGAAAATAGGGTTACACGTTCATGTCCCTTTTATAAGAAAATCCCAGGGACAACATTCACTGTTGATGCTTTTCGGTATGGGTGTGTTGAAGGGTGCTCAGCGTATTTTCTTACTCATTTCCATTGCGATCACTATGGTGGTCTTAGCAAGAAATGGTCACATGGCCCAATATATTGCTCTCCTCTCACGGCACGGCTTGTTCAAATGTGTCTCTCGGTAAATCCTTTCCTCCCAAATGACCAACACTATTTGCACACTGGGGACTTTAGAGCGTGTAAAGCAATGCAAGCTTACCATCTTCTTGTAAATCAACGTGTGAATGTACTTTATTTGGATACTACATATTGCAACCCAAAATACAGGTTCCCTTCCAAGGAAGATGTACTAAATTATGTTGTCAAAATTACAAAGAACCACCTCAAAACCCATCACAGAACTTTAGTGGTTGTTGGCGCATACAGTATTGGCAAAGAATGTGTATATCTTGCAATTTCTAAAGCTCTCGGGCTAAAAATTTATGCCAATGCTTCAAGAAGACGGATTTTACAAGCTTTTGGTTGGCCCGACCTTTCAGATAGACTCTGTACTAAAGGAAATAACACACTTCTCCATGTTCTGCCCATGTCATCTTTGAGACCTGAGTCCTTAAAGGATTACTTGCAGACCTACAAGGAGCAATTCACAGCAGTTTTAGCATTTCGTCCAACTGGTTGGACTTTCAATGAGAAGATGAGCAACGATCTGGAACTAATTAAACCTGTTACCAAAGGAAATATCACAATATATGGGGTTCCCTACAGTGAGCACTCCAGCTTCATAGAACTGCGAGATTTTGTTCAGTTTTTGAGACCTGACAAGATCATTCCAACTGTGAACGTTGGGAATGCTGCTAATCGAGAAAAGATGCAATCCTACTTCCGAGACTGGTTGTCGTGCTAA 1443 0.4477 MALSTDASPPPPLGNEPLPQDGDGYDVNNDDVASFGVVSLDEDGFPSQLPGSETPPEKSSFAADFYRCGSDWSSLLLLEDNNNRHSDFEGSSGKKMKQANLFQIWGFRRNDAVGSVESRPSLSGYSDDGGGSSERKIVKPGNWGSILRDTGRESENTKSVRKRKGFSGENRVTRSCPFYKKIPGTTFTVDAFRYGCVEGCSAYFLTHFHCDHYGGLSKKWSHGPIYCSPLTARLVQMCLSVNPFLPNDQHYLHTGDFRACKAMQAYHLLVNQRVNVLYLDTTYCNPKYRFPSKEDVLNYVVKITKNHLKTHHRTLVVVGAYSIGKECVYLAISKALGLKIYANASRRRILQAFGWPDLSDRLCTKGNNTLLHVLPMSSLRPESLKDYLQTYKEQFTAVLAFRPTGWTFNEKMSNDLELIKPVTKGNITIYGVPYSEHSSFIELRDFVQFLRPDKIIPTVNVGNAANREKMQSYFRDWLSC* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00480 480 Gene3D - 173 247 IPR036866 -
Lapu1g00480 480 MobiDBLite consensus disorder prediction 41 60 - -
Lapu1g00480 480 CDD SNM1A-1C-like_MBL-fold 170 286 - -
Lapu1g00480 480 MobiDBLite consensus disorder prediction 1 32 - -
Lapu1g00480 480 PANTHER DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED 246 471 - -
Lapu1g00480 480 MobiDBLite consensus disorder prediction 115 134 - -
Lapu1g00480 480 Pfam DNA repair metallo-beta-lactamase 358 463 IPR011084 -
Lapu1g00480 480 FunFam DNA cross-link repair 1A 289 437 - -
Lapu1g00480 480 Gene3D - 289 437 - -
Lapu1g00480 480 SUPERFAMILY Metallo-hydrolase/oxidoreductase 198 473 IPR036866 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00480 Lapu-Chr1 15952787 15957427 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00480 K15340 - gmx:100790844 778.089