Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00477 ATGAAGAACAGAACATCAAGGTTGCTGAAGCAGATCATATCAAATCTGAGCTCAATGGCCAAGTCAAAAACCATGGCCTTGAAGTCCAAAACAAACGCCATACGGGCTCGTTTGCTCATATTCTCAATGATGAAGAACAAAAAGTTCTTGATGAGTTCCCTCTCTGAGAAGTTCCATTCTATGTGGGGGCATGATTCTCAGTCCAAGGATGATTGCTTATTGGAAGATGGCAATGACCAAAGCAAGGCCATAGTGTTGTACAACAATTTACACTCCTACGAGGCCTTGCCAAACCCCGGTGAAACCCTGGTGGTGGAGGAGCAAGACCAAGAGGGCTATGAAGGTTACTACAACTATGATGGCGATGATGACAAGTACCCGGATCTCACACACACCCTTTTTGAGTCTGAGGATTTGGATCTCGGAAGGTCGGTGATTGACATGGTGAAGAATTCAAAGGAAGAGGCAGGGAAAGAGTTTAAACTGGAGGATGAGATTGACTTCGCAGCTGACCTTTTCATCATGAAGTTCCGCAGGCAAATGGTGTTGCAGAAGCAAGAGTCCTTAAAGAGGAAGAGGGAAATGCAGGAAAAGGGTGCATGA 603 0.4544 MKNRTSRLLKQIISNLSSMAKSKTMALKSKTNAIRARLLIFSMMKNKKFLMSSLSEKFHSMWGHDSQSKDDCLLEDGNDQSKAIVLYNNLHSYEALPNPGETLVVEEQDQEGYEGYYNYDGDDDKYPDLTHTLFESEDLDLGRSVIDMVKNSKEEAGKEFKLEDEIDFAADLFIMKFRRQMVLQKQESLKRKREMQEKGA* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00477 200 PANTHER EMB|CAB67623.1-RELATED 1 198 - -
Lapu1g00477 200 Pfam Cotton fibre expressed protein 163 195 IPR008480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00477 Lapu-Chr1 15856014 15857335 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00477 - - gmx:100807332 288.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00477 1 15856014 15857335 Lapu1g00477 1 15856014 15857335 ECH