Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00472 ATGATTCCTCTGTCCCATAACTTAGTCTCTGTTCATCTGGGTGGAGTGCCCCGTGACCCTCCTTACCCAATTGCGTCGGATCCCTCTCTTAATAAGCCTTCTTCTTTTCTTTCTCTGTTTTGGAATTGCAAGAGGAGAAGGAGGTGGAAAATATCTACTACTATGGCTTCTAACATCAGGACCAACAATTTCCTGCGCCACGTGGAATCAATGAAGCTTATGCCATCAGGTGCAGGTCACATTCCACACTTGAATGCTGTGATACTTGGTGATTCTCTCGCCACTGAAGAGGATGATTTCGTTCTTCCCAGTGAGGACTTTGCTAGCGAAGCTAATGTTCAGTCTCCTGAACAGTATCTGAAGATGTACAAGAGATCCATTGAGGACCCTGACGGATTCTGGTCTGAAATTGCGGCAGAGTTTTATTGGAAACAGAAATGGGGTCATAAAGTATGTAATGAAAATTTTGATGTAAGGAAAGGGAATATCAAGATTGAGTGGTTCAAGGGTGGGATCACCAACATCTGTTACAATTGCTTGGATAGAAATGTTGAAGCTGGACTAGGTGACAAGGTAGCCATTTACTGGGAAGGCAATGAACCTGGTTTGGATGGTACTTTGACATACACACAGCTTCTTCATCAAGTTTGCCAGCTTGCTAACTACCTGAAGGATATTGGCGTGAAAAAGGGAGATGCTGTAATTATTTATTTGCCTATGCTTATGGAGCTCCCCATCGCAATGCTTGCCTGTGCCCGGATTGGTGCTGTTCATTCGGTAGTATTTGCTGGTTTTTCTGCAGAAGCCCTTGCCCAGAGAATCATTGATTGTAAACCAAAAGTTGTAATTACTTGCAATGCTGTTAAAAGGGGCTCTAAGGCTCTCTATCTGAAAGATATTGTTGATGTTGCAATCAAGGATTCAGCCCAAAATGGAGTTTCTATAGATAAATGCCTAGTTTATGAAAACTCATGGGCAACGAAGAGGGAAGATACCAAATGGAAGGACGGGCGTGATATATGGTGGCAGGATGTCATTCCTCAATATCCTACTAGTTGTCCAGTGGAGTGGGTTGATGCAGAGGATCCACTTTTTCTACTCTATACAAGTGGGAGTACAGGCAAACCTAAGGGTGTCATGCATACAACTGGTGGTTACATGGTGTACACTGCAACCACATTCAAGTATGCATTTGACTACAAGCCGTCTGACATCTACTGGTGTACAGCAGATTGTGGTTGGATTACTGGGCATAGCTATGTCACATATGGACCCATGCTCAATGGTGCATCTGTTATTGTGTATGAAGGGGCTCCTAATTATCCTGATGCTGGGCGATGTTGGGACATTGTTGACAAATATAAAGTGTCAATATTCTACACTGCCCCCACATTGGTGCGGTCCCTCATGCGTGATGGTGATGCGTTTGTTACTCGCTACTCAAGGAAATCATTACGAGTCCTAGGAAGTGTAGGTGAGCCCATAAATCCTAGTGCATGGAGGTGGTTTTACAATGTAGTTGGAGATTCAAGGTGCCCTATCTCTGACACTTGGTGGCAAACAGAAACGGGTGGCTTCATGATAACTCCACTACCTGGTGCTTGGCCCCAGAAACCCGGTTCAGCAACTTTCCCTTTCTTTGGAGTTCAGCCTGTCATAGTGGATGAAAAAGGTGTTGAAATAGAAGGTGAGTGCAGTGGATATTTGTGTGTTAAGAAATCGTGGCCTGGAGCATTCAGAACTCTGTATGGTGATCATGAAAGATATGAAACAACATATTTCAAGCCATTTGCGGGATACTATTTCAGTGGTGATGGCTGCAGCAGGGATAAAGATGGATACCATTGGCTCACTGGAAGAGTTGATGATGTCATCAATGTCAGTGGGCATCGGATTGGCACGGCAGAAGTGGAATCAGCTCTAGTTTCGCATCCTAAATGTGCAGAGGCTGCTGTCGTTGGTGTGGAGCATGCGGTGAAAGGACAGGGTATCTATGCATTTGTTACAATAGTGGATGGTGTTCCTTACAGTGAGGAACTACGGAAGGATCTCATCCTCACTGTTCGAAAGCAGATAGGAGCCTTTGCAGCACCTGACAAAATCCATTGGGCACCTGGCCTTCCAAAAACAAGGAGTGGAAAGATAATGCGAAGAATTCTGAGAAAAATTGCTTCCAGGCAGTTGGATGAACTTGGAGACACAAGTACCCTTGCAGATCCAAACGTGGTCAATCAACTTATAGAACTTGCAGATTCTTGA 2259 0.4444 MIPLSHNLVSVHLGGVPRDPPYPIASDPSLNKPSSFLSLFWNCKRRRRWKISTTMASNIRTNNFLRHVESMKLMPSGAGHIPHLNAVILGDSLATEEDDFVLPSEDFASEANVQSPEQYLKMYKRSIEDPDGFWSEIAAEFYWKQKWGHKVCNENFDVRKGNIKIEWFKGGITNICYNCLDRNVEAGLGDKVAIYWEGNEPGLDGTLTYTQLLHQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSAEALAQRIIDCKPKVVITCNAVKRGSKALYLKDIVDVAIKDSAQNGVSIDKCLVYENSWATKREDTKWKDGRDIWWQDVIPQYPTSCPVEWVDAEDPLFLLYTSGSTGKPKGVMHTTGGYMVYTATTFKYAFDYKPSDIYWCTADCGWITGHSYVTYGPMLNGASVIVYEGAPNYPDAGRCWDIVDKYKVSIFYTAPTLVRSLMRDGDAFVTRYSRKSLRVLGSVGEPINPSAWRWFYNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCVKKSWPGAFRTLYGDHERYETTYFKPFAGYYFSGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPKCAEAAVVGVEHAVKGQGIYAFVTIVDGVPYSEELRKDLILTVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQLDELGDTSTLADPNVVNQLIELADS* 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00472 752 Gene3D - 100 622 IPR042099 -
Lapu1g00472 752 FunFam Acetyl-coenzyme A synthetase 100 622 - -
Lapu1g00472 752 PANTHER ACETYL-COENZYME A SYNTHETASE 103 748 - -
Lapu1g00472 752 Hamap Acetyl-coenzyme A synthetase [acs]. 96 750 IPR011904 GO:0003987|GO:0016208|GO:0019427
Lapu1g00472 752 ProSitePatterns Putative AMP-binding domain signature. 366 377 IPR020845 -
Lapu1g00472 752 NCBIfam acetate--CoA ligase 114 748 IPR011904 GO:0003987|GO:0016208|GO:0019427
Lapu1g00472 752 FunFam Acetyl-coenzyme A synthetase 623 752 - -
Lapu1g00472 752 Gene3D - 623 752 IPR045851 -
Lapu1g00472 752 CDD ACS 117 739 - -
Lapu1g00472 752 Pfam AMP-binding enzyme C-terminal domain 636 714 IPR025110 -
Lapu1g00472 752 Pfam Acetyl-coenzyme A synthetase N-terminus 119 179 IPR032387 -
Lapu1g00472 752 SUPERFAMILY Acetyl-CoA synthetase-like 106 747 - -
Lapu1g00472 752 Pfam AMP-binding enzyme 188 627 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00472 Lapu-Chr1 15744777 15755603 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00472 61 751 Acyl Lipid Metabolism Gene Families AT5G36880 83.213 0.0 1235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00472 K01895 - gmx:100789257 1467.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00472 1 15744777 15755603 Lapu1g00472 1 15744777 15755603 ECH