Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00468 ATGCCCAGTGGTAGTAGGAATCCTCTTGTGGTTGGGCGTGTTATAGGGGAAGTAGTAGACCCCTTTGAAAGTTCCATTCCTTTCAGAGTCTCCTATGGCAATAAAGATGTCAACAATGGTTGTGAGCTTAAACCTTCCCAAGTTGCCAACCAACCCAGAGTCAGTGTTGGTGGAGATGATCTCAGGAACTTCTATACTCTGGTGTTAGTAGATCCTGATGCTCCCAGCCCAAGTAACCCTAATTGCAGGGAGTACCTTCATTGGTTGGTGACTGATATTCCAGCAACTACCGGGGCTAGTTTCGGTAACGAGGTTGTAAGTTATGAAAGCCCACGACCAACGATGGGGATTCATCGTTTGGTGTTTGTGTTGTTCCGTCAACAGTATCGACAGAGGGTGTATGCTCCTGGGTGGCGACAGAATTTCAACACCAGAGAATTTGCTGAACTCTACAATCTTGGATTGCCAGTTGCTGCTGTCTTCTTCAACTGTCAGAGGGAAACTGGTTCTGGTGGTAGGACATTTTGA 528 0.4678 MPSGSRNPLVVGRVIGEVVDPFESSIPFRVSYGNKDVNNGCELKPSQVANQPRVSVGGDDLRNFYTLVLVDPDAPSPSNPNCREYLHWLVTDIPATTGASFGNEVVSYESPRPTMGIHRLVFVLFRQQYRQRVYAPGWRQNFNTREFAELYNLGLPVAAVFFNCQRETGSGGRTF* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00468 175 Pfam Phosphatidylethanolamine-binding protein 52 159 IPR008914 -
Lapu1g00468 175 CDD PEBP_euk 27 164 IPR035810 -
Lapu1g00468 175 ProSitePatterns Phosphatidylethanolamine-binding protein family signature. 65 87 IPR001858 -
Lapu1g00468 175 FunFam Terminal flower 1 3 173 - -
Lapu1g00468 175 SUPERFAMILY PEBP-like 13 167 IPR036610 -
Lapu1g00468 175 PANTHER PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN 12 168 IPR035810 -
Lapu1g00468 175 Gene3D - 2 170 IPR036610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00468 Lapu-Chr1 15611365 15614178 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00468 K16223 - gmx:100781509 342.428