Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00449 ATGGCTGAGGTTTTGACCAAGGCGAGTTTGGTTTCTTCGTGGCAAGGTAGTAGTCAACGCTACCATCGAAGAGTATCGACGGTTCCCAGTTCTTGTACCTTTGTTTCCGACGTGGGAAGGTTCCCTTCTCTCAAGTTAAAGTCTCAGATTCTCAGATCTTGGTCCCCTTCTTCTGAGTTTCAGGGTAAAAAACTTGTCTTTCCTGTAAATAGAGGAATACCCAACAGGGTCAGTTCGCGGTTGAGAGCTTCAACTGCAGCTCAGATGACCCTTAGAATAGGGAAAGTTCAGAAATGGTGGGAAAAGGGGCTTCAACCCAACATGAAAGAGGTGTCTTCCGCCCAAGATCTTGTTGAATCACTGTTAAACGCAGGGGACAAATTGGTGGTGGTTGATTTTTTCTCTCCTGGCTGTGGCGGCTGCAAAGCCCTTCACCCTAAGATATGTCAACTGGCAGAGATGAATCCTGATGTTCAATTCCTTCAGGTGAACTACGAGGAGCATAAGTCCATGTGTTATAGCCTCAATGTCCATGTTCTTCCCTTCTTCCGCTTCTATAGAGGTGCTCATGGTCGATTATGTAGTTTTAGCTGCACCAATGCCACGATCAAGAAGTTTAAAGATGCATTGGCCAAACACTCCCCAGATAGATGCAGTTTGGGCCCAACCAAAGGGTTAGAGGAGAAAGAGCTCCTTGCTCTTGCTGCCAACAAAGATCTTTCGTTTACCTACTCACCAAAACCTTTACAACCTGCACAGGCAAATGAAGAGTCGGCAACTGCTCTCACCGCTGTTCCTAGTTCAGAATCTCTTCCTTCATTGACCCGCAATTCTGAGGTCTCCAAAGAGAAAACCTTGGCCACTGCTGGGAGATGA 876 0.4669 MAEVLTKASLVSSWQGSSQRYHRRVSTVPSSCTFVSDVGRFPSLKLKSQILRSWSPSSEFQGKKLVFPVNRGIPNRVSSRLRASTAAQMTLRIGKVQKWWEKGLQPNMKEVSSAQDLVESLLNAGDKLVVVDFFSPGCGGCKALHPKICQLAEMNPDVQFLQVNYEEHKSMCYSLNVHVLPFFRFYRGAHGRLCSFSCTNATIKKFKDALAKHSPDRCSLGPTKGLEEKELLALAANKDLSFTYSPKPLQPAQANEESATALTAVPSSESLPSLTRNSEVSKEKTLATAGR* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00449 291 SUPERFAMILY Thioredoxin-like 97 213 IPR036249 -
Lapu1g00449 291 FunFam Thioredoxin-like 1-2, chloroplastic 97 215 - -
Lapu1g00449 291 MobiDBLite consensus disorder prediction 247 291 - -
Lapu1g00449 291 Pfam Thioredoxin 119 190 IPR013766 -
Lapu1g00449 291 ProSiteProfiles Thioredoxin domain profile. 77 215 IPR013766 -
Lapu1g00449 291 CDD TRX_family 124 188 - -
Lapu1g00449 291 PANTHER THIOREDOXIN, MITOCHONDRIAL 80 246 - -
Lapu1g00449 291 MobiDBLite consensus disorder prediction 247 284 - -
Lapu1g00449 291 Gene3D Glutaredoxin 101 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00449 Lapu-Chr1 15214792 15217957 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00449 - - var:108327816 506.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00449 1 15214792 15217957 Lapu1g00449 1 15214792 15217957 ECH