Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00446 ATGGAAAAAAACTGGGTTTTGAGATGGGTGTTGGTGGTGGGGGTGATGTTTTGGTGTGGGGAAGGGATTGGTGTGAATTGGGGAACCCAAGCAACACACAAGTTGCCCCCAGACACAGTGGTTCAGATGTTGAAGGACAATGGGATTCAGAAAGTGAAGCTTTTTGATGCAGATGACTCCACCATGAGTGCCTTGGCTGGGACTGGGATTGAAGTCATGGTAGCTATCCCTAATATCCAGCTTGCTGAGATGAATGACTATGGCAGGGCCAGACAGTGGGTTAAGAAAAACGTCACTCGTTATAACTTCAATGGGGGTGTTAATATCAAGTATGTAGCAGTTGGGAACGAGCCATTTTTGAAATCCTACAACAATTCTTTCTTGAACATAACGTTTCCTGCTCTTCAAAACATTCAAAATGCCCTTAACGAGGCAGGTGTTGGAGACACAGTAAAGGCTACAGTACCATTGAATGCAGATGTGTATCAGTCTCCAGACAACAATCCTGTTCCATCTGCAGGAATATTTAGGCCTGATATTAGTGGTCTCATGACCCAGATAGTGCAATATCTCAGCAAGAATGGTGCACCATTTACTGTGAACATTTACCCCTTCTTAAGTCTTTATGGAAACGATGATTTTCCTTTCAACTACGCCTTCTTTGATGGCGTAGACAATCCGGTAAACGATAATGGTACTCCATACACCAATGTGTTTGATGCAAATTTTGATACCTTGGTTGCTGCTCTGAAATCAGTGGGGTTTGGAGACCTGCCTATTTTGGTGGGAGAAGTAGGATGGCCAACAGAAGGAGACAAGAATGCCAATGTGGGCAATGCTTTGAGGTTCTATAATGGCCTTCTGCCAAGGCTTGCCGGCAATAGAGGCACACCGCGCCGCCCTGGACACATTGAAGTTTATCTTTTTGGACTCATTGATGAGGATGCCAAGAGCATTGCTCCAGGAAACTTTGAACGCCACTGGGGAATATTCAGATATGATGGACAACCCAAGTTTCCGATGGACCTTTCTGGTCAGAACCAAAACAAATTTCTCATAGGTGCACAGAATGTGAAGTACCTTGCTCCAAGGTGGTGCATGTTTAATCCTGATGCTAAGGATCTAACCAACCTTCCAGATAACATCAACTATGCTTGCACCTTTGGAGATTGCACTGCACTTGGATACGGATCCTCTTGCAACAACCTTGATGCTAATGGCAATGCCTCTTATGCTTTTAATATGTACTTCCAGGTGCAAAATCAGAACCCAATGGCCTGCAATTTTCAAGGTTTGGCCAAGCTTACTACGGACAATATCTCAACACCCACTTGCAATTTTATCATTCAGATAGTTAGTTCTTCAGCCTCTTCTTTGATTCCCTCACTTGTTGCTTTCTTGTTTGTTATTTCATTCATGATTCTGTTTTGGTAG 1434 0.4365 MEKNWVLRWVLVVGVMFWCGEGIGVNWGTQATHKLPPDTVVQMLKDNGIQKVKLFDADDSTMSALAGTGIEVMVAIPNIQLAEMNDYGRARQWVKKNVTRYNFNGGVNIKYVAVGNEPFLKSYNNSFLNITFPALQNIQNALNEAGVGDTVKATVPLNADVYQSPDNNPVPSAGIFRPDISGLMTQIVQYLSKNGAPFTVNIYPFLSLYGNDDFPFNYAFFDGVDNPVNDNGTPYTNVFDANFDTLVAALKSVGFGDLPILVGEVGWPTEGDKNANVGNALRFYNGLLPRLAGNRGTPRRPGHIEVYLFGLIDEDAKSIAPGNFERHWGIFRYDGQPKFPMDLSGQNQNKFLIGAQNVKYLAPRWCMFNPDAKDLTNLPDNINYACTFGDCTALGYGSSCNNLDANGNASYAFNMYFQVQNQNPMACNFQGLAKLTTDNISTPTCNFIIQIVSSSASSLIPSLVAFLFVISFMILFW* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00446 477 Gene3D - 361 459 - -
Lapu1g00446 477 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 17 436 IPR044965 GO:0004553|GO:0005975
Lapu1g00446 477 FunFam Glucan endo-1,3-beta-glucosidase 5 22 349 - -
Lapu1g00446 477 SUPERFAMILY (Trans)glycosidases 23 342 IPR017853 -
Lapu1g00446 477 Pfam Glycosyl hydrolases family 17 23 342 IPR000490 GO:0004553|GO:0005975
Lapu1g00446 477 Gene3D Glycosidases 21 351 - -
Lapu1g00446 477 SMART X8_cls 364 447 IPR012946 -
Lapu1g00446 477 FunFam Glucan endo-1,3-beta-glucosidase 8 360 456 - -
Lapu1g00446 477 ProSitePatterns Glycosyl hydrolases family 17 signature. 258 271 IPR000490 GO:0004553|GO:0005975
Lapu1g00446 477 Pfam X8 domain 365 433 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00446 Lapu-Chr1 15154148 15158100 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00446 6 475 Miscellaneous Gene Families AT1G64760 73.830 0.0 701
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00446 - - gmx:100815300 915.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00446 1 15154148 15158100 Lapu1g00446 1 15154148 15158100 ECH