Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00439 ATGGCAGCTGTTGCTCCTTCTTCTGACAAAACTGCAGATTTATTGCAAAATTTGACCCTGGAGTCTGAGTCCAAAGCCATTGGAGTTGCAGAGCCTGCGAAGAAGAATGGACCTGGTTTTTCCAAGGCTGCAGCTAAAGGGATGGGCAAGCCGTTCAATCCAAAGTCAAGCTTTGTTCCAAATGGATACCCTTCGGCATACTATTATGGAGGTTATGACGGGCAAGGTGATTGGAATGTTTATTCCAGATATATGAACCTTGATGGAGGGATGACTCAGGGTGTTTACGGAGACAACTGCTCTTATATGTACCATCAAGGTTATGGTTATACACCATATGGAACATATGCACCGGCCAATTCCTCTTCTCCAATGATTCAACAAGATGGTCAGCATTATGGGCTGCAACAGTACCAATATCCATGTTCTTATTACAAATCTCCAGCTTCTGCTGATGTGTCATTTACTCCAAACAAAATCACTGCTACGCAAGGAGAAATATCGACTGCAATTGATGCTGATCGTGTTGCTTCATCAAATGTTACAAATAAAGGAAACACTGTTAACATGGTCAATAGTGATTTTCCGAGTAAAAATGGGTTAAAGTCATTTTTAACTAGTTCCCAGCATACGACTTTTCATTCAAACGATTCTTATCAAGGGACTAGCTTGCCACCTTATGCCCCTTTGTCAGGATATCAGGGCCCAAGAATGAGTACTCATGGTACACAATTGCCAGTCCCATCTGATGTGTCCTTAATATCTGATAGACAGTCCAGACATGGAGCCAAGGTTGGTTTATCTTCATCAATGGCGCCTGTCAAAGATTTTACTTCTCAAAGGAATCAAGGACTTCAGCAACTTCCGCCATTTGGGAACTTGAATGGTTCCAGACATCCATCTGGACTTGAACTGGTTTCTGGAATCATGAACGGGATGTATCCAAGCAACAGGATGTACGGCCAATATGGGAACACATTTAGGGCTAATTCTCGTTTTGGATCTGCTGCATATGGATCTAGAATGGGCTCGGCTGATTACAAGCATAATGCCACAGGTGATGGCTATGGTCTTAACCATTTTAAGAAAAGTATGGATGGTTTCAGTGAGCTAAACAAGGGACCAAGAGCTGCCAAAAGTTCTGATAATAAAAATATCAAGAGTCTTGGACCTGTTACATTACTACTGAAAGGACAGAACCTTCCAGTGAAGAGTGATAACAAAGAAGTTCTTTTGGTACCCAATAAAGAACAATACAGTGGGAAAGATTTTTCTGAGAATTACTCTGATGCCAAGTTTTTTGTCATCAAATCCTATAGTGAGGATGATATTCATAAAAGCATAAAGTATAGTGTTTGGGCAAGTACCCCTAATGGAAATAAAAAACTGGATGTGGCATATCAAGAAGCGAAGGAGAAGACTGGTGGCTGTCCCATATTTTTGTTATTTTCGGTCAACACTAGTGGGCAATTTGTTGGTTTAGCAGAGATGTTGGGTCCTGTTGATTTTGATAAAAGTGTAGATTATTGGCAGCAGGACAGGTGGACTGGTTGCTTTTCTGTGAAGTGGCATGTCATAAAGGATATTCCAAATAGCGCGTTGAGGCACATAACACTAGAAAACAATGAAAACAAACCTGTAACGAATAGCAGGGATACTCAGGAGGTTAAGTTTGAGAGGGGAGTTCAAGTTGTGAAAATTTTCAAGGAGCATTCAAGCCAAACATGCATCTTGGATGATTTTGGGTTTTACGAGGCTCGTGAAAAGGCAACTCAGGAGAAGAAATCCAAGGAGCAGCAGTTCCCAAAACAGATCAGCAAACCCAGCGATTTGACAATTGGGACAGTCACATTGTTAAAGTCTCTTGATGCTACCTTGATGAATGAAGCTGCTACTGCAAATACAACGGAAGATAGAATGAATTCAGAGGGGCTCCTAGAAGGGGATGGATCGACCACAGCACCTGAAGACTCTTCTAAGAGCTGTTAA 1989 0.4158 MAAVAPSSDKTADLLQNLTLESESKAIGVAEPAKKNGPGFSKAAAKGMGKPFNPKSSFVPNGYPSAYYYGGYDGQGDWNVYSRYMNLDGGMTQGVYGDNCSYMYHQGYGYTPYGTYAPANSSSPMIQQDGQHYGLQQYQYPCSYYKSPASADVSFTPNKITATQGEISTAIDADRVASSNVTNKGNTVNMVNSDFPSKNGLKSFLTSSQHTTFHSNDSYQGTSLPPYAPLSGYQGPRMSTHGTQLPVPSDVSLISDRQSRHGAKVGLSSSMAPVKDFTSQRNQGLQQLPPFGNLNGSRHPSGLELVSGIMNGMYPSNRMYGQYGNTFRANSRFGSAAYGSRMGSADYKHNATGDGYGLNHFKKSMDGFSELNKGPRAAKSSDNKNIKSLGPVTLLLKGQNLPVKSDNKEVLLVPNKEQYSGKDFSENYSDAKFFVIKSYSEDDIHKSIKYSVWASTPNGNKKLDVAYQEAKEKTGGCPIFLLFSVNTSGQFVGLAEMLGPVDFDKSVDYWQQDRWTGCFSVKWHVIKDIPNSALRHITLENNENKPVTNSRDTQEVKFERGVQVVKIFKEHSSQTCILDDFGFYEAREKATQEKKSKEQQFPKQISKPSDLTIGTVTLLKSLDATLMNEAATANTTEDRMNSEGLLEGDGSTTAPEDSSKSC* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00439 662 Gene3D ph1033 like domains 412 582 - -
Lapu1g00439 662 Pfam YT521-B-like domain 431 569 IPR007275 GO:0003723
Lapu1g00439 662 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 78 632 IPR045168 -
Lapu1g00439 662 ProSiteProfiles YTH domain profile. 431 568 IPR007275 GO:0003723
Lapu1g00439 662 MobiDBLite consensus disorder prediction 632 662 - -
Lapu1g00439 662 CDD YTH 432 568 IPR007275 GO:0003723
Lapu1g00439 662 FunFam YTH domain family 1, isoform CRA_a 411 583 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00439 Lapu-Chr1 15030216 15035287 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00439 - K20102 gmx:100818027 1144.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00439 1 15030216 15035287 Lapu1g00439 1 15030216 15035287 ECH