Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00434 ATGCAATCGCACCTTGTGGTGGGACCCATCTCCGTTGCACGCTATGGTGGCGCCGCCGATTCCAGCCCCTTCCATTCCGCCGCACCTTCCTGCTGGACCAACTCTCCTCGCCGGCGCTCTCCACTCGTCGTGGCCTCCTCCTCGCCCGCCGCCGTCAACGGCGGCCAGAATCACTACGCCGTGCTCGGCGTCGCCCGAACTGCCACCGTCGTCGACATCAAACGCGCTTATCGCCTCCTCGCCCGCAAGTATCATCCCGATGTTAGCAAGGATCCGCATGCTGCAGAATTATTCAAGAGCATCCATCATGCATATGAAGTACTATCTAATGAAGCAACGAGAATTCAGTATGATCAAGAACTTCAATTTAGTCAAAAGTCTCCCAGGGAAAAATGGAGTTACAATACTGAGTTTGAAGATCAGGTAAGAGTCTATAGATGGGCGCACCTGAGGAAAAAAATGCATAGTGAAAGATACTGGGAGCATTACAATGTCAATGAGGACTACACCAGTGAAACAGAGGAGGAAGAAGATGAAGAAAATTTGGATGAAGAGAGGGGTTCTTTTATTGAAGTGCTTAGATCAGCGTTCTTGTCATTATTTTTGTTTCAGACTTTTGGATCCCGACTCTCGCTTACATTTAGCGGTCTGACAGCATTGTTCGATGAAAAGTTGGACACCGGCTATAAAATTGGCCATATAATAGCATGGATTTTGGGTGGTACGAGTGGCATATTGCTAACGTTGTGCTTGTCATTTGCAAGTTGGGTTTGCGGGAAAACTAGTAGTAGCGTTGTTGCACTAATTGTGGTGGCCATGTGGGTTGGCTCCTACCTTGCAAGGTATGCACCACTTCCCCAAGGTGCTCTATTGGCGCTTCTCTACATGTCCATTAAGCTACAGTCTGACCTAATATAA 918 0.4847 MQSHLVVGPISVARYGGAADSSPFHSAAPSCWTNSPRRRSPLVVASSSPAAVNGGQNHYAVLGVARTATVVDIKRAYRLLARKYHPDVSKDPHAAELFKSIHHAYEVLSNEATRIQYDQELQFSQKSPREKWSYNTEFEDQVRVYRWAHLRKKMHSERYWEHYNVNEDYTSETEEEEDEENLDEERGSFIEVLRSAFLSLFLFQTFGSRLSLTFSGLTALFDEKLDTGYKIGHIIAWILGGTSGILLTLCLSFASWVCGKTSSSVVALIVVAMWVGSYLARYAPLPQGALLALLYMSIKLQSDLI* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00434 305 CDD DnaJ 57 110 IPR001623 -
Lapu1g00434 305 ProSiteProfiles dnaJ domain profile. 57 121 IPR001623 -
Lapu1g00434 305 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 120 296 - -
Lapu1g00434 305 SUPERFAMILY Chaperone J-domain 56 124 IPR036869 -
Lapu1g00434 305 SMART dnaj_3 56 113 IPR001623 -
Lapu1g00434 305 FunFam Uncharacterized protein 54 200 - -
Lapu1g00434 305 ProSitePatterns Nt-dnaJ domain signature. 98 117 IPR018253 -
Lapu1g00434 305 Pfam DnaJ domain 57 118 IPR001623 -
Lapu1g00434 305 PRINTS DnaJ domain signature 59 77 IPR001623 -
Lapu1g00434 305 PRINTS DnaJ domain signature 77 92 IPR001623 -
Lapu1g00434 305 PRINTS DnaJ domain signature 93 113 IPR001623 -
Lapu1g00434 305 Gene3D DnaJ domain 55 199 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00434 Lapu-Chr1 14917700 14924264 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00434 57 122 Miscellaneous Gene Families AT5G49580 42.029 1.27e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00434 - - gmx:100791619 471.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00434 1 14917700 14924264 Lapu1g00434 1 14917700 14924264 ECH