Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00427 ATGATGGCGAACGATCCCAGGCAGAACGAAGCCCAAGTGGCGCTAATTCTGGGCCCGGATTCTTCTCATCTCGAATCCCTAATTTCACACTTGATGTCGTCCTCCAACGACCAGCGCTCTCAGGCCGAGTCTCTCTTCAACCTCTGCAAGCAGGCCCGCCCGGAATCCCTCCTCCTAGGCCTCGCTCACCTCCTCCACACTGCCCCCAACCCGGAGTCCCGCACCATGTCCGCTATCCTCCTCCGCCGCCACCTCACGCGCCACCACGACTCCTTCCTCTGGCCCCTCCTCTCCCCCGCCGCCCGCTCCTCCCTCCAGTCTCTCCTCCTCTCCTCCCTCCAACAAGAGCCTATCAAATCCATCGCCAAGAAGCTTTGCGACACCGTCTCCGAACTAGCCGCCGCAATCCTCCCCGAGGACCCCGCCGCCTGGCCCAACCTACTCCCGCTCCTCTTCCAGTGGGTCACCTCCAGCAAAGCCAGGCTCCAGGAAGTCTCGCTCCTCATATTCGCCCAATTAGCGCACTACATCGGTCAAACCCTACTCCCTCAATTGTCCACTCTCCACTCCGTCTTTCTCCGTTGCCTCCACTCCTCCACCCCCTCCGACGTCCGCATCGCCGCTCTCGCCGCATCCATCAACTTCATTCAGTGCCTCACCAGTTCCTCTGACCGCGACCGCTTCCAGGACCTCCTCCCTCTCATGATGAAGACGCTCACCGAGGCACTGAACTCTGGCCAGGAGGCCGTCGCTCAGGAAGCGCTCGAGCTACTCATCGAGCTCGCAGGTACCGAGCCGCGGTTCCTCCGGCGCCAGATTGTCGACGTCGTGGGCTCCATGCTGCAGGTCGCGGAAGCCGAGGCCTTGGAGGAAGGGACACGACACTTGGCGATTGAGTTTGTTGTCACTCTCGCCGAGGCCAGGGAACGCGCCCCTGGGATGATGAGGAAGTTGCCGGAGTTTGTGAGGAAGCTTTTTGGCGTGTTGCTGAATTTGTTGCTGGATATTGAGGATGTTCCTGCGTGGCACGCTGCAGTGGATGAGGAGGAGAATGCTGGTGAGACAAGTAACTATGGGTTTGGACAGGAGTGTTTGGATAGGCTTTCGATTTCGCTGGGCGGGAACACCATTGTGCCTGTTGCTTCTGAGTTGTTGCCCACTTACTTGTCTGCTCCTGAGTGGGAAAAGCACCATGCTGCGCTCATTGCACTTGCGCAGATTGCGGAAGGTTGTTCGAAGGTGATGATAAAGAATCTGGAGCAGGTATTGTCAATGATTTTAAATTCATTTCGTGATCCCCATCCTCGAGTGCGATGGGCAGCTATAAATGCGATTGGGCAGTTGTCCACGGATTTAGGACCAGATTTGCAGGTTAAATTTCACCACTTAGTGCTGCCGGCTTTGGCTGGTGCGATGGATGATTTTCAAAATCCAAGAGTGCAGGCTCATGCTGCTTCTGCTGTGCTAAATTTCACTGAGAATTGTACACCTGATATTCTAACTCCTTACTTAGATGGGATTGTGAGCAAACTTTTGGTTCTCTTGCAGAATGGCAAGCAAATGGTTCAAGAAGGGGCTTTGACCGCTTTAGCATCAGTTGCAGATTCTTCACAGGAGCAATTTCAGAAGTATTATGATGCTGTGATGCCATACTTAAAAGCTATTCTGGTGAATGCAAATGATAAATCTAATCGTATGCTTCGAGCCAAAGCTATGGAGTGCATTAGTTTGGTAGGAATGGCTGTTGGAAAGGGGAAGTTCAGGGATGATGCCAAACAGGTCATGGATGTCTTGATGTCACTGCAACAGTCTCAACTGGATGCTGATGATCCAACTGCTAGTTACATGTTACAAGCATGGGCACGGCTTTGCAAGTGCCTTGGGCAGGATTTTCTCCCATATATGGGTTTTGTGATGCCTCCTTTGATCCAGTCTGCACAACTTAAGCCTGATGTGACCATTACATCTGCGGATTCTGATACTGAATTTGATGAAGATGATGACAGCATTGAAACAATCACACTTGGGGATAAAAGGATAGGCATTAAGACTAGTGTTTTGGAGGAGAAGGCTACTGCTTGTAACATGCTGTGTTGCTATGCTGATGAGTTGAAGGAAGGTTTTTTTCCTTGGATTGACCAGGTTGCTTCCACATTGGTTCCTCTTCTTAAATTTTACTTCCATGAAGAAGTTAGGAAGGCTGCAGTTTCAGCCATGCCAGAACTGTTGTCCTCAGCAAAATCAGCTGTAGAGAAGGGACAATCACAAGGTCGTGATGAGACTTACATAAAGCAGTTGTCTGATTATATAATACCAAATTTGGTGGAGGCTTTACACAAGGAGCCCGAAGTGGAAATTTGTGCAAGCATGTTGGACGCATTGAATGAATGCATACAGGTATCTGGGCCACATCTAGATGAAAAGCAAGTACGGAGTATTGTTGATGAGATTAAACAAGTTCTTACAGCCAGTTCAACAAGAAAACATGAAAGAGCAGAGAGGGCCAAAGAAGAGGACTTTGATGCTGAAGAAAGAGAGCTACTCAAGGAAGAAAATGAGCAAGAAGAGGATCTTTTTGATCAAGTTGGTGATTGCTTGGGAACTTTGATAAAAACATTCAGGACATCCTTCTTGCCTTTCTTTGATGAGCTGTCCTCATACATAACACCTATGGTTGGTAAAGATAAAACCTCCGAGGAAAGGAGAATTGCCATTTGTATATTTGATGATGTTGCTGAGCACTGTCGTGAAACCGCTCTCAAATATTACGATTCTTTCCTTCCATTCTTACTAGAAGCTTGCAATGACGAATATCCAGACGTTCGACAGGCTGCTGTTTATGGTGTTGGTGTTTGTGCCGAGTTTGGTGGATCTGTTTTCAAACCCCTTGTTGGAGAGGCGCTCTCAAGGTTAGATGCTGTGATAAGGCATCCAAATGCACAACTTTCTGATAACGTAATGGCATATGACAATGCTGTTTCAGCTCTCGGGAAAATATGCCAGTTTCACCGTGATAGCATAAATGCGCCACAGGTTGTTCCTGCCTGGCTGAGTTGCTTGCCTATAAAAGGTGATTTAATCGAGGCTAAGGTTGTGCACGACCAACTTTGCTCAATGGTTGAAAGATCAGATAGAGAACTTATAGGTCCCAACAATCAATATCTTCCTAAAATTGTCGCTGTCTTTGCGGAGATTTTATGTGCGGGAAATGATCTGGCTACTGAACAAACTGTGAGTCGGATGATTAATCTGTTGAGGCAGCTACAACGGACTTTGCCACCTTCAACCCTTGCTTCAACCTGGTCATCCTTGCAGCCTCAGCAGCAGCTTGCACTTCAGTCCATCCTCTCATCCTAG 3357 0.4906 MMANDPRQNEAQVALILGPDSSHLESLISHLMSSSNDQRSQAESLFNLCKQARPESLLLGLAHLLHTAPNPESRTMSAILLRRHLTRHHDSFLWPLLSPAARSSLQSLLLSSLQQEPIKSIAKKLCDTVSELAAAILPEDPAAWPNLLPLLFQWVTSSKARLQEVSLLIFAQLAHYIGQTLLPQLSTLHSVFLRCLHSSTPSDVRIAALAASINFIQCLTSSSDRDRFQDLLPLMMKTLTEALNSGQEAVAQEALELLIELAGTEPRFLRRQIVDVVGSMLQVAEAEALEEGTRHLAIEFVVTLAEARERAPGMMRKLPEFVRKLFGVLLNLLLDIEDVPAWHAAVDEEENAGETSNYGFGQECLDRLSISLGGNTIVPVASELLPTYLSAPEWEKHHAALIALAQIAEGCSKVMIKNLEQVLSMILNSFRDPHPRVRWAAINAIGQLSTDLGPDLQVKFHHLVLPALAGAMDDFQNPRVQAHAASAVLNFTENCTPDILTPYLDGIVSKLLVLLQNGKQMVQEGALTALASVADSSQEQFQKYYDAVMPYLKAILVNANDKSNRMLRAKAMECISLVGMAVGKGKFRDDAKQVMDVLMSLQQSQLDADDPTASYMLQAWARLCKCLGQDFLPYMGFVMPPLIQSAQLKPDVTITSADSDTEFDEDDDSIETITLGDKRIGIKTSVLEEKATACNMLCCYADELKEGFFPWIDQVASTLVPLLKFYFHEEVRKAAVSAMPELLSSAKSAVEKGQSQGRDETYIKQLSDYIIPNLVEALHKEPEVEICASMLDALNECIQVSGPHLDEKQVRSIVDEIKQVLTASSTRKHERAERAKEEDFDAEERELLKEENEQEEDLFDQVGDCLGTLIKTFRTSFLPFFDELSSYITPMVGKDKTSEERRIAICIFDDVAEHCRETALKYYDSFLPFLLEACNDEYPDVRQAAVYGVGVCAEFGGSVFKPLVGEALSRLDAVIRHPNAQLSDNVMAYDNAVSALGKICQFHRDSINAPQVVPAWLSCLPIKGDLIEAKVVHDQLCSMVERSDRELIGPNNQYLPKIVAVFAEILCAGNDLATEQTVSRMINLLRQLQRTLPPSTLASTWSSLQPQQQLALQSILSS* 1119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00427 1118 Coils Coil 833 853 - -
Lapu1g00427 1118 PANTHER IMPORTIN BETA 28 1090 IPR040122 GO:0006606
Lapu1g00427 1118 Pfam HEAT repeats 388 487 - -
Lapu1g00427 1118 Pfam Importin repeat 288 379 IPR041653 -
Lapu1g00427 1118 Pfam HEAT repeat 926 954 IPR000357 GO:0005515
Lapu1g00427 1118 ProSiteProfiles HEAT repeat profile. 422 460 IPR021133 -
Lapu1g00427 1118 SUPERFAMILY ARM repeat 690 1093 IPR016024 -
Lapu1g00427 1118 SUPERFAMILY ARM repeat 20 829 IPR016024 -
Lapu1g00427 1118 Gene3D - 20 1117 IPR011989 -
Lapu1g00427 1118 Pfam Interferon-related developmental regulator (IFRD) 491 627 IPR007701 -
Lapu1g00427 1118 SMART TOG_3 371 619 IPR034085 -
Lapu1g00427 1118 Pfam Importin repeat 6 787 892 IPR041389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00427 Lapu-Chr1 14778914 14789256 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00427 K20222 - gmx:100797431 1949.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00427 1 14778914 14789256 Lapu1g00427 1 14778914 14789256 ECH