Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00418 ATGCAGGCAACTGAGACCAGGACTGTTCAAGTTAAGCAGCTTTCAGATCTAGCTGGTGAGAGAGAGATTCACGAGTTCTTCTCCTTTTCCGGAGAAATTGAGCATGTTGAGATCCTGAGTGAAGATGGGAAATCAAAGACTGCATATGTGACATTTAAAGATCCCAAAGCACTTGAAATTGCATTATTGTTATCGGGAGCAACCATAGTGGACCAAGTTGTGAGGATAACTCCAGCTGAGAACTATGTACCAAATCGTGAGATGCAGGAAGTAAGGGTGGTGGAAAATGCTATAAATGTTGCTCCTTCTGAAAATGTCTCTATAGACATTGAGGAAGGTAAAGCCAGCCCCACCAATAGAAGAATCTACCTTACTAAAGCACAAGATGCAGTAACAAGTATGCTGGCAAAAGGTTCAGCAATAAGACAGGATGCCGTGAACAAAGCTAAAGCATTTGATGAAAAACATCAACTGACTGCCAATGCATCTGCAAAGGTCATTTCTTTTGACAAGAGAGTTGGACTGACTGAGAAATTGACAGTAGGCATTGCTGCCGTGAATCAGAAAGTCAAATCTGTGGATCAGAGGCTTCATGTTTCAGATAAAACAATGGCAGCTATTATTGCAGCGGAGAGGAAGCTGAATGACACTGGATCGGCTGTCAAAACAAGCAGATATGTGACTGCTGGAACAGCATGGTTAAATGGTGCTTTTAGCAAGGTGGCAAAGGCTGGACATGTTGCAAGTACTAAAACTAGAGAAAAATTTAGTTTGGCTGTTTCAAACTTGACATCGAAGATTATTGAGGTGAAACTTCGTATTGGAGAACCATATAAAAAACACTTAAAAACCGGAACTAACCTTTGTCCAAATTTTAAACCTGTAATTTTTTTCCTTTGTTAA 903 0.4042 MQATETRTVQVKQLSDLAGEREIHEFFSFSGEIEHVEILSEDGKSKTAYVTFKDPKALEIALLLSGATIVDQVVRITPAENYVPNREMQEVRVVENAINVAPSENVSIDIEEGKASPTNRRIYLTKAQDAVTSMLAKGSAIRQDAVNKAKAFDEKHQLTANASAKVISFDKRVGLTEKLTVGIAAVNQKVKSVDQRLHVSDKTMAAIIAAERKLNDTGSAVKTSRYVTAGTAWLNGAFSKVAKAGHVASTKTREKFSLAVSNLTSKIIEVKLRIGEPYKKHLKTGTNLCPNFKPVIFFLC* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00418 300 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 11 72 IPR000504 GO:0003723
Lapu1g00418 300 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 7 81 IPR000504 GO:0003723
Lapu1g00418 300 Gene3D - 1 91 IPR012677 -
Lapu1g00418 300 SUPERFAMILY RNA-binding domain, RBD 4 88 IPR035979 GO:0003676
Lapu1g00418 300 CDD RRM_Vip1_like 9 77 IPR034360 -
Lapu1g00418 300 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 6 258 - -
Lapu1g00418 300 SMART rrm1_1 8 77 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00418 Lapu-Chr1 14552730 14557252 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00418 - - gmx:100779011 475.322