Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00403 ATGAAGGTGGTGGCGCTCGTTAGCGGCGGCAAAGACAGTTGCTATGCCATGATGAAGGCTATTCACTATGGCCACGAGATTGTTGCATTGGCGAATTTGATGCCGCTTGATGATTCTGTGGACGAGCTCGATAGTTACATGTACCAAACTGTTGGACATCAAATTATTGTCAGGTACGCAGAATGCATGGGATTGCCATTGTTCAGGAGGCGAATACAAGGCACCTCAAGGCATCAGGAGCTTGGTTACAAAGCAACTCAAGGTGATGAAGTTGAAGACTTGTTCATTTTGTTACGTGAAGTGAAAAGGAAGATACCCTCAGTTAATGCAGTGTCTTCTGGAGCTATTGCATCTGACTATCAGAGATTGCGGGTGGAAAGTGTTTGTTCAAGGTTAGGCCTTGTTTCTTTGGCATACTTATGGAAACAAGATCAGTCATTGCTTCTCCAGGAAATGATTACAAATGGAATTGTAGCTGTAACCGTGAAGGTAGCTGCCATGGGTTTGGATCCTGCAAAGCACTTGGGTAAAGAATTAGCCTTCTTAAATGCTTATTTACATAAATTGAAAGAATTATATGGAATAAATGTTTGTGGTGAAGGAGGGGAATATGAAACATTAACTCTAGATTGTCCTCTCTTCTCTAATGCTCGCATTGTGCTAGATGAACATCAAGTTGTGATGCACTCTTCAGATTCCATAGCTCCTGTTGGAATCCTTCATCCCTTGGCATTTCATTTGGAAAATAAAGGAGATGTTCAGGATTTAAAATCACAAGACAACATACATGAGATTTGTACTCAGAAACTGGGATCTGTGTATGAAGTACACGACAGTCTAGAAGGATGTGAGGCCATGTTCAAGCCCGTGGATTATAGGAATGATGTAGTGGATGGCACAGAGCATAAATTTAACATTTCAAGAACAAATAACAAGGGCACATTTTCCCTAAGTTTCTGGTTGCAAGATTCATGCAATGGCTTGCAGGAAGACTTGAAGATTGTCTTGGGGAAAATTGAATCACAGTTATCGGGCCTTGGTTTTGGATGGGAGAATGTCATCTATATTCACCTTTACATTGATGACATGAATAAGTTCTCTGAGGCAAATGAGACGTATGTAAAGTTTATAAGACAGGAGAAATGTCCATTTGGTGTCCCCTCTCGTAGTACTGTTGAAATGCCTCTTATAGAATCAGGTTTCAGCAGCGCATACATAGAAGTTCTGGTATCAAACAATAAAAATAAAAAGGTTTTGCATGTGCAGAGTATTTCCTGTTGGGCACCTAGTTGCATTGGGCCATACAGCCAGGCAACCTTGCATGAGGGTATACTTCACATGGCTGGTCAATTAGGGCTTGATCCTCCTACAATGAATCTTTGCCAGGGAGGTCCTGGTGTTGAACTGGAACAAGCACTAAAAAACAGTGAAGCGGTGGCAAAATGCTATAATTGTTCAGTATCAACATCTGCTATTGTTTTTGTTATTTATTGTTCTAAACGTATTTCATCATCAGAGAGACTCAATATTCAGGAGAAACAAGAAACAATCCTTAGGCAGATGAAGATCTCCTGTCTGCAGGAAGGAAACACCGACAAAGTGTTGGATCCCTTGTTCCTTTATGTTCTTGTTCCTGATCTACCTAAAAGAGCATGTGTAGAAGTAAAGCCTATTCTTTATGTTGAGGATGGAACAGATACAGTACCTGAGGCCATAACTGAAAGATCTAGATCTGAGACAGCACCACGTTATTGGGGTTTCAAGCCTGAAAATTGGCATGATTCTTGCATTCAGAAATGTGTGGTTTCTGGGAAGATATGTGCCATTATACTGTATATTACAAGTGAGCTGGCCACGAAGATATGTTTTGACTCTCAACCTGCTGATTATGTGAAAAATGGTCAATATTCTTTTCCTAAGGCATATATGCAGAAGATTTCGAAGTTCTGCATTTATCTTCTTGACAAAGTTATGATTGATAATGACTTCACCTGGGAAGATATAATGAGTTTGAGGTTCTACATCCCGGAAAGCCTTCAAATGTCAGTGCAGCTATTACAACCGATGTTCTGCAATGCACTTTTTGAACTTTCGGAAATGAGTCAGAAGAAATTTAAAAATGGTGAGGAGCCAATCTTCAACATAGTTCCTGTCATAGGAGCTGGGAAGTCTGCCTCATCCATGGATGATGTAGTAACCTGTGAATTATTGGCTCGGAAATCCTGA 2226 0.4052 MKVVALVSGGKDSCYAMMKAIHYGHEIVALANLMPLDDSVDELDSYMYQTVGHQIIVRYAECMGLPLFRRRIQGTSRHQELGYKATQGDEVEDLFILLREVKRKIPSVNAVSSGAIASDYQRLRVESVCSRLGLVSLAYLWKQDQSLLLQEMITNGIVAVTVKVAAMGLDPAKHLGKELAFLNAYLHKLKELYGINVCGEGGEYETLTLDCPLFSNARIVLDEHQVVMHSSDSIAPVGILHPLAFHLENKGDVQDLKSQDNIHEICTQKLGSVYEVHDSLEGCEAMFKPVDYRNDVVDGTEHKFNISRTNNKGTFSLSFWLQDSCNGLQEDLKIVLGKIESQLSGLGFGWENVIYIHLYIDDMNKFSEANETYVKFIRQEKCPFGVPSRSTVEMPLIESGFSSAYIEVLVSNNKNKKVLHVQSISCWAPSCIGPYSQATLHEGILHMAGQLGLDPPTMNLCQGGPGVELEQALKNSEAVAKCYNCSVSTSAIVFVIYCSKRISSSERLNIQEKQETILRQMKISCLQEGNTDKVLDPLFLYVLVPDLPKRACVEVKPILYVEDGTDTVPEAITERSRSETAPRYWGFKPENWHDSCIQKCVVSGKICAIILYITSELATKICFDSQPADYVKNGQYSFPKAYMQKISKFCIYLLDKVMIDNDFTWEDIMSLRFYIPESLQMSVQLLQPMFCNALFELSEMSQKKFKNGEEPIFNIVPVIGAGKSASSMDDVVTCELLARKS* 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00403 741 FunFam Endoribonuclease 291 411 - -
Lapu1g00403 741 Pfam Diphthamide synthase 1 229 IPR002761 -
Lapu1g00403 741 CDD eu_AANH_C_2 435 559 - -
Lapu1g00403 741 NCBIfam diphthine--ammonia ligase 1 230 IPR002761 -
Lapu1g00403 741 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 1 241 - -
Lapu1g00403 741 SUPERFAMILY YjgF-like 326 397 IPR035959 -
Lapu1g00403 741 Gene3D - 160 257 - -
Lapu1g00403 741 Pfam Endoribonuclease L-PSP 329 399 IPR006175 -
Lapu1g00403 741 Pfam Endoribonuclease L-PSP 428 497 IPR006175 -
Lapu1g00403 741 CDD Alpha_ANH_like_IV 2 214 IPR002761 -
Lapu1g00403 741 Gene3D - 306 410 IPR035959 -
Lapu1g00403 741 FunFam diphthine--ammonia ligase 1 158 - -
Lapu1g00403 741 FunFam Diphthine--ammonia ligase 159 255 - -
Lapu1g00403 741 Gene3D - 411 561 IPR035959 -
Lapu1g00403 741 Gene3D HUPs 1 157 IPR014729 -
Lapu1g00403 741 PANTHER DOMAIN OF UNKNOWN FUNCTION 71 DUF71 -CONTAINING PROTEIN 1 738 IPR030662 -
Lapu1g00403 741 FunFam Endoribonuclease 412 560 - -
Lapu1g00403 741 SUPERFAMILY YjgF-like 417 564 IPR035959 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00403 K06927 - gmx:100807009 1318.14