Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00396 ATGTATCTTCCCCGCCACATCCTCACCAGACTCTCCCCGCAATGCCGCCACTTCTCCCACTCCACCGCTGCCGCCATCCTCCACCCTCCGGAGCCGGAGCCCCTCACTTACCTTGACGGTTTTCCTCGCCCGGATCCCAAGCACGATGAGACCATCCTCGCTGTCCCCCGCGCGGACTCTGGCAAGAACATTTCTGCGAAGGAGCGACGCGTCGGGCGCTTGCCGAGCATCGTCTTCGAGCAGGAGGACGGCCAGCACGGCGGCAACAAACGCCTCATCTCCGTCCGCACCGACCAGATCAGAAAATTGGTCAGCCACCTCGGCCAGTCCTTCTTCCTCTCCCGCCTCTTCCACCTCGAAGTCCGCTCGCAGTTCGACTCTGACGATGTCGTTGAGAGCGTTCGCGTCTTGCCTCGCAAGATTCATTTGAAAGCTGGTACAGACGCGCCGTTGAATGTGACCTTTATAAGGGCTCCGTCGCACGCTTTGTTGAAAGTTGATGTTCCTCTTGTCTTCAGAGGAGATGATATATCGCCTGGACTCAAGAAAGGTGCCTCTTTGAATACCATCAAAAGGACTGTCAAGTTCTTATGCCCTGCTGACATTATTCCCCCATATATTGACGTGGATTTAAGTGAGTTGGATGTGGGCCAGAAGTTGGTAATGGGAGATCTCAAAGTTCACCCTGCTTTAAAACTTCTTCAGTCAAAAGATGAAGCTGTTTGTAAAATTATGGGCCAAAGAGTTTCTGAAATACAAAAGAAATCTAAGTAA 774 0.5271 MYLPRHILTRLSPQCRHFSHSTAAAILHPPEPEPLTYLDGFPRPDPKHDETILAVPRADSGKNISAKERRVGRLPSIVFEQEDGQHGGNKRLISVRTDQIRKLVSHLGQSFFLSRLFHLEVRSQFDSDDVVESVRVLPRKIHLKAGTDAPLNVTFIRAPSHALLKVDVPLVFRGDDISPGLKKGASLNTIKRTVKFLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSKDEAVCKIMGQRVSEIQKKSK* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00396 257 PANTHER RIBOSOMAL PROTEIN L25/GLN-TRNA SYNTHETASE, ANTI-CODON-BINDING DOMAIN-CONTAINING PROTEIN 29 253 - -
Lapu1g00396 257 Gene3D Ribosomal Protein L25; Chain P 51 158 IPR020056 -
Lapu1g00396 257 Pfam Ribosomal L25p family 54 155 IPR029751 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Lapu1g00396 257 SUPERFAMILY Ribosomal protein L25-like 51 251 IPR011035 GO:0006412
Lapu1g00396 257 Pfam Ribosomal protein TL5, C-terminal domain 164 246 IPR020057 -
Lapu1g00396 257 Gene3D Ribosomal protein L25, beta domain 162 253 IPR037121 -
Lapu1g00396 257 FunFam 50S ribosomal protein L25 163 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00396 Lapu-Chr1 14149363 14152515 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00396 K02897 - gmx:100809143 455.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00396 1 14149363 14152515 Lapu1g00396 1 14149363 14152515 ECH