Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00389 ATGATTGTGAGGGATGAAAATAGTGGTGTTGGTTTGGGGGGAGGAGGAAGATGGTTTAGGGGTTTCGGAAGCTTGATTAGGAGGAAGCAAGTTGATTCGGTTCACGCCAGGAGACATGGTCAATTGGCTAGGAAGTTATCTGCTGTTGATCTCGTTGGAATTGGGGTTGGAGCTACCATAGGAGCTGGAGTGTATATTCTCATTGGAACAGTTGCCAGAGAGCAAGCAGGACCAGCACTTGTGATATCACTTCTCATTGCAGGAATAGCCGCTGGACTGTCAGCCTTTTGCTATGCAGAGCTTGCATGTCGGTGCCCATCTGCTGGAAGTGCTTATCATTATACATACATATGCATCGGAGAAGGGGTTGCTTGGTTGGTCGGTTGGTCTCTGATTCTAGAATATACAATCGGTGCTTCTGCTGTTGCTCGTGGAATAACACCAAATCTGGCCTTGTTTTTTGGTGGAGAGGAAAACCTACCTTTGTTTTTGGCTCGACACACGTTACCAGGTCTTGGAATTGTGGTTGATCCGTGTGCAGCTGCTTTAATTCTTCTTGTTACAGTACTCCTGTGCCTTGGAATCAAGGAGAGTTCAACGGCGCAATCTATTGTGACAACAGTAAATGTTGGTGTCATGCTTTTCATCATTTTAGTCGGTGGATATCTAGGTTTCAAGTCTGGATGGGTTGGATATGAACTCTCCAGCGGGTATTTTCCTTACGGATTGAATGGGATGTTTGCTGGGTCTGCAATAGTTTTCTTCTCATACATTGGTTTTGATTCGGTTACCAGCACAGCTGAGGAGGTGAAAAATCCTCAACGAGACCTGCCAATCGGCATATCAACTGCGTTAACCATATGTTGCATTCTGTATATGCTTGTAGCTGCAGTTATTGTTGGTTTAGTACCATATTATGATTTGAACCCTGATACCCCAATCTCTTCAGCATTTTCTAGTTATGGGATGGAGTGGGCAGTGTATATAATAACAACTGGAGCTGTTACTGCTCTTTTTTCAAGTCTGCTGGGTTCTGTTCTTCCTCAGCCACGTGTCTTTATGGCAATGGCTAGGGATGGTTTATTGCCTCCTTTCTTCTCAGACATCCATAAAGGCACACAGATTCCTTTGAAAAGTACCATTGTCACTGGTGTCTTTGCAGCCACTCTTGCATTCTTTATGGATGTTTCCCAATTAGCAGGGATGGTTAGCGTGGGAACATTGCTTGCATTTACAACAGTTGCAGTTTCAGTTTTGATAATCAGATATGTCCCACCTGATGAGGTACCTATTCCGTCTTCACTTCTAACATCTGTTGATCAATTATTGGGGCATTCTGGTGGTCATATTGGCGAAGATGGGGCCATAAGTCCTGTAGATCCTGCTAGTTATTGTGAGGATAGCCGTCTACATGACAAGTCTGAGGCTCTACTTGGACACCCTTTAATCATAAAAGAAGTTACCAAAGATGCACAGAATGAGAAATCTAGGAGAAAACTTGCTGCATGGACCATAGCGCTTCTATGTATAGGGATTCTAATAGTTACCAGTGCGGCTTCAGCTGACTGGTGTCCCAGGATTTTGCAGATAACGTTTTGTGGAATGGGTGGTGTTCTTCTTTTGTGCAGTGTAATTGTACTGGCCTGCATAAAGCAAGATGATACAAGGCACAGCTTTGGACATTCAGGAGGTTTTGCTTGCCCATTTGTTCCATTCTTGCCTACTGCATGTATTCTTATAAACACCTACTTACTAATTGACCTTGGAGTTGCTACATGGTTACGAGTTTCAATATGGTTGTTAATAGGAGTACTCATATACTTGTTCTATGGCCGCACTCATAGCTCACTTTTACATGCAATCTATGTTCCCTTAGCGTATGCTGATGAAATCCATCGTTCTCAAGCAATTCATCTTGCCTAG 1923 0.4353 MIVRDENSGVGLGGGGRWFRGFGSLIRRKQVDSVHARRHGQLARKLSAVDLVGIGVGATIGAGVYILIGTVAREQAGPALVISLLIAGIAAGLSAFCYAELACRCPSAGSAYHYTYICIGEGVAWLVGWSLILEYTIGASAVARGITPNLALFFGGEENLPLFLARHTLPGLGIVVDPCAAALILLVTVLLCLGIKESSTAQSIVTTVNVGVMLFIILVGGYLGFKSGWVGYELSSGYFPYGLNGMFAGSAIVFFSYIGFDSVTSTAEEVKNPQRDLPIGISTALTICCILYMLVAAVIVGLVPYYDLNPDTPISSAFSSYGMEWAVYIITTGAVTALFSSLLGSVLPQPRVFMAMARDGLLPPFFSDIHKGTQIPLKSTIVTGVFAATLAFFMDVSQLAGMVSVGTLLAFTTVAVSVLIIRYVPPDEVPIPSSLLTSVDQLLGHSGGHIGEDGAISPVDPASYCEDSRLHDKSEALLGHPLIIKEVTKDAQNEKSRRKLAAWTIALLCIGILIVTSAASADWCPRILQITFCGMGGVLLLCSVIVLACIKQDDTRHSFGHSGGFACPFVPFLPTACILINTYLLIDLGVATWLRVSIWLLIGVLIYLFYGRTHSSLLHAIYVPLAYADEIHRSQAIHLA* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00389 640 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 26 616 - -
Lapu1g00389 640 Gene3D Amino acid/polyamine transporter I 487 622 - -
Lapu1g00389 640 Gene3D Amino acid/polyamine transporter I 42 440 - -
Lapu1g00389 640 FunFam probable cationic amino acid transporter 42 434 - -
Lapu1g00389 640 Pfam C-terminus of AA_permease 565 615 IPR029485 -
Lapu1g00389 640 PIRSF AA_transporter 490 623 - -
Lapu1g00389 640 PIRSF AA_transporter 23 432 - -
Lapu1g00389 640 Pfam Amino acid permease 46 428 IPR002293 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00389 Lapu-Chr1 14003340 14011197 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00389 22 640 Organic Solute Cotransporters AT3G03720 64.791 0.0 798
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00389 K13863 - gmx:100816704 1141.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00389 1 14003340 14011197 Lapu1g00389 1 14003340 14011197 ECH