Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00387 ATGCCCTTCTGCAGGGAGTGCATATCACTATACATACATATGCCTTGGAGAAGGGTACTCTATTTCCCTTATGCTGCACTTTTTGGTGATAAGGAGAATTTACCAGTGTTCATAGCGCGTTACCATATTCCTGGAATAGATGTTGTTGTGGACCCATGTGCAGCTATCTTGGTATTACTTGTTACAGGACTCTTATGTCTGGGCATCAAGGAGAGTACAGTGGTACAAGGCATAGTGACAACAGTGAATATATGTGCATTGCTTTTTGTCATAGCAGCTGGTAGTTACGTGGGATTCAAGTCTGGTTGGGTTGGATATGAACTTCCTACGGGACTTTTCCCCTTTGGGTTTAATGGTATGCTGGCTGGCTCTGCCACAGTATTCTTTGCATATATAGGCTTTGATGCAGTTGCCAGCACTGCTGAAGAGGTGAAAAATCCTCAACGAGATTTACCCCTTGGTATTGGAGGTGCCTTGTTTCTTTGCTGTGGGATATATATGATGGTGTCCATCGTTGTAGTTGGGTTAGTACCTTATCATGCAATTGATCCGGATACCCCAATATCTTCTGCATTTGCTGAAAAAGGAATGCAATGGGCAGCTTACATTATAAATGCTGGTGCTTTCACAGCTCTCTGCTCAGCATTGTTGGGTGGGATACTTCCCCAGCCGCGAATTTTGATGTCTATGGCAAGGGATGGACTGCTGCCACCTTTTTGTGCTGATATAAATAAGAAGACTCAGGTTCCTGTTAAGGGCACAATAGCTACTGGCATTGCGGCTGCAGGCTTGGCATTTTCTATGGAGGTCTCTGAACTGGCAGGGATGGTTAGTGTGGGTACACTTTTAGCATTTACCATGGTGGCGATGTCTGTTTTGATCCTAAGATATATCCCTCCAAATGAAGTCCCTGTGCCTCCATCTCTCAAGGACTCAATTGCTTCAGTGCTGAAGCGGTATAGTTTGAGCAGTTCAGATACAAATGTGGGAGATGTAGATGCTAATACTCCTGAGCATAAAAAGCCTTTAATTATTAAGGAGGATGTTTCAATTGATTTTGCTAAACATTTTACTGTAGGAAACCATATAATAGAAGCTGACAGGCGAAAAGTTGTTGGGTGGATCATATCATTCATATTCTTAGGGGCGTTTGTCCTTGCATATGCAGCTTCAAATTTCAATCTGCTTAGTTCTGTTCGCTTTGCATTGTGTGGAGTTGGAGGTGCTATTCTTTTGTGTGGTTTTGTTTTCCTAACCAGCATAGATCAAGATGATGCAAGACATGACTTTGGGCACTCTGGAGGTTTTATTTGCCCATTTGTGCCACTGCTTCCCATAGCTTGCATTCTCATCAATTCCTACTTACTCGTTAATCTTGGATATGGTACATGGTTGCGTGTTTCTATATGGCTGGGAACAGGACTACTAGTTTATCTGTTTTATGGTCGAACTCATAGCTTTTTAAAAGATGCAATTTATGTGCCAACAAAGCAAGTGGATGAAATTTACCAAACTCATATAAACTGTGATGCTTAA 1536 0.4219 MPFCRECISLYIHMPWRRVLYFPYAALFGDKENLPVFIARYHIPGIDVVVDPCAAILVLLVTGLLCLGIKESTVVQGIVTTVNICALLFVIAAGSYVGFKSGWVGYELPTGLFPFGFNGMLAGSATVFFAYIGFDAVASTAEEVKNPQRDLPLGIGGALFLCCGIYMMVSIVVVGLVPYHAIDPDTPISSAFAEKGMQWAAYIINAGAFTALCSALLGGILPQPRILMSMARDGLLPPFCADINKKTQVPVKGTIATGIAAAGLAFSMEVSELAGMVSVGTLLAFTMVAMSVLILRYIPPNEVPVPPSLKDSIASVLKRYSLSSSDTNVGDVDANTPEHKKPLIIKEDVSIDFAKHFTVGNHIIEADRRKVVGWIISFIFLGAFVLAYAASNFNLLSSVRFALCGVGGAILLCGFVFLTSIDQDDARHDFGHSGGFICPFVPLLPIACILINSYLLVNLGYGTWLRVSIWLGTGLLVYLFYGRTHSFLKDAIYVPTKQVDEIYQTHINCDA* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00387 511 PIRSF AA_transporter 355 497 - -
Lapu1g00387 511 PIRSF AA_transporter 19 308 - -
Lapu1g00387 511 Gene3D Amino acid/polyamine transporter I 23 317 - -
Lapu1g00387 511 Pfam C-terminus of AA_permease 436 486 IPR029485 -
Lapu1g00387 511 Pfam Amino acid permease 53 302 IPR002293 GO:0016020|GO:0022857|GO:0055085
Lapu1g00387 511 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 29 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00387 Lapu-Chr1 13976409 13982952 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00387 25 505 Organic Solute Cotransporters AT5G36940 62.112 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00387 K13863 - gmx:100784895 808.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00387 1 13976409 13982952 Lapu1g00387 1 13976409 13982952 ECH