Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00380 ATGGCCATGTTGAACAATTCTAATACCACCACACAATCACAGATCAGCCGCATCCAAGCACAAGTTCCACAGCAAAGGCTTCCATTCACAGTCCCCATCAAGGCACAAGTTTCAAACTTTCCCAATAGAACAACAGTGGCGGGTCCAGCAGCAAGAAGGGTTTTCCAGATTTTCTTCTACTTGTATTTGTTCCTAGTTGCAGTCTTGGTGATTTTCCTTACCATATATGGTCTTGTCTCGGACGCTCACACCCACCATTTCCACCCTCTGAAATGGTACCCCCCACTTCTAGCTTCGACAGCATGTGCTGGAATTGTTGGTTTCACGTGGCAATACATCACTGCACAACACTCCACAAGGGTAGTCAGGTTAGCATTTTGGTTGAGTCCCCTGCTAACATGCGCAATGGGAATTATGTTTATATGTATTGGCACTGCAATGAGTCTGGCAGTTGGTGTAATTGCTTTGGTTTCTGCATTAATCCAATCCCTCTATGGTTGTTGGGTCAGTCCCAGATTTGAATATGGCACCAGAATCTTGTCAGTTTCAATAGCTTTTCCTCCTAACAAAACCCAGGGGCTAACCCTTTATTCAATCCTCATTGGCATCCTTTACTGCTGTTTCCTGGTGGCTGGGATTGGAGGAGCTAGAGCCATTGAAAAAAGAACCAAATTATCAGCCTTTTTCATCTTCTTGATCTTGTTGAGCCTAGGATGGACTATGCAGTTTCTGAAGAACGCAATGTATGTCACTATTTCAAGGGTCAAGTATATGCATTTTTCTGGAGGAGTTGACATGGACAGTAGAGTTGCATTTTGTGACACAATCAAGCACTTAACTGGATGTGTTTCCATAGGCTCCATCCTGGTTCCCATCATCGTGCTCTTCCGGGGTTTTGCACGAACCACAAGTCTAGTTGGAGGAGATACAGATGAGTTCATGTTTTCCTGTGTCAGTTGCTATATGGGGATTGCATCTCTTCTCGTGATCCGTGGAAACCGATGGGGTTTTGTGCACGTTGGAGTTTACAACAAAGGGTTTGTGCAGGCATCTTCTGATACTTGGGAGATGTTCATTAGAGTTGGATTGGAGGAACTCATAGACTTGGATCTCACTGGAGCATTCTGTTTCCTCAGTGGGGTTGGCACAGGTGCAATATGTAGTCTAGTGGGTGGAATTTGGAGTCTTGTAATGCACAAGAGCTATGCCACAGAAGTATCCATTTATGCTTTCCTCATTGGCTATTTCATGTGTCGATTGGCCATAGCATGGGCACAAGCTAGTGTTGCAGCTTACTATGTTGCCTACGCAGAAAATCCACAGAGCACTAATTTTGACTCCACTATTCCAGTACGCTTGGAGCAGCTTAACAGATCTCAAGCTCTGCAAATATTCAGAGCTAGTAATTTCAGCAGAGCCTAA 1422 0.4451 MAMLNNSNTTTQSQISRIQAQVPQQRLPFTVPIKAQVSNFPNRTTVAGPAARRVFQIFFYLYLFLVAVLVIFLTIYGLVSDAHTHHFHPLKWYPPLLASTACAGIVGFTWQYITAQHSTRVVRLAFWLSPLLTCAMGIMFICIGTAMSLAVGVIALVSALIQSLYGCWVSPRFEYGTRILSVSIAFPPNKTQGLTLYSILIGILYCCFLVAGIGGARAIEKRTKLSAFFIFLILLSLGWTMQFLKNAMYVTISRVKYMHFSGGVDMDSRVAFCDTIKHLTGCVSIGSILVPIIVLFRGFARTTSLVGGDTDEFMFSCVSCYMGIASLLVIRGNRWGFVHVGVYNKGFVQASSDTWEMFIRVGLEELIDLDLTGAFCFLSGVGTGAICSLVGGIWSLVMHKSYATEVSIYAFLIGYFMCRLAIAWAQASVAAYYVAYAENPQSTNFDSTIPVRLEQLNRSQALQIFRASNFSRA* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00380 473 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 74 458 IPR007603 GO:0022857|GO:0055085
Lapu1g00380 473 Pfam Plasma-membrane choline transporter 153 440 IPR007603 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00380 Lapu-Chr1 13789029 13790853 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00380 - - var:108328067 845.114