Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00379 ATGGGGCTCAAAATTTTCATGGCTTCCTTCATGGTAACCTCAATCTTGTTCTTTCTCATCTTCCTTCCCACAAGATTGACCATACAAATCTCCAGCCTTAGACCTGCTGTGAACTACATGAGTGTCCCAAAGAACAGCAAGGCCTATCCAGTTACTTTTGCTTACTTGATCTCTGCATCAAAAGGAGATGTTGGGAAGCTCAAAAGGTTGATGAGGGTGCTGTATCATCCGGGGAACTACTATCTGATTCATATGGATTATGGGGCTCCAGAGGCTGAACACAGGGAAGTGGCAGAATATGTGGCTAGTGATCCTGTTTTTGGTCAAGTGGGGAATGTTTGGGTTGTGGGGAAGCCTAATTTGGTCACATATAGAGGACCAACCATGCTTGCTACCACTCTCCATGCCATGGCAATGCTTCTCAGGACCTGCCAATGGGACTGGTTTATTAATCTTAGTGCATCTGATTATCCCTTAGTTACACAAGATGATCTGATCCAAGTGTTTTCTGAGTTGCCAAGGGATATCAATTTCATACAGCACAGCAGTCAACTGGGTTGGAAACTGAATAAGAGAGGGAAGCCAATAATAATAGATCCAGGGCTTTATAGCCTGAATAAATCAGAAATTTGGTGGGTCATTAAGCAGAGGACTCTACCAACATCTTTTAAGCTCTACACAGGTTCAGCTTGGACAATACTATCAAGATCTTTTGCAGAATATTGCATAGTGGGATGGGAAAATTTGCCAAGGACCCTCCTCCTCTACTACACCAACTTTGTGTCATCCCCAGAAGGATATTTCCAAACGGTTATATGCAACTCTGAAGACTACAAGAACACCACTGTTAACCATGATCTTCACTACATTACATGGGACAACCCTCCAAAACAACACCCTAGGTCTCTAGGACTCAAGGATTACAGGAAAATGGTTCTCAGTAGCCGTCCTTTTGCCAGAAAATTCAAGAGAAATGATCCAGTCCTGGATAAAATTGATAGAGAACTTCTGAAGAGGTATCATGGACAATTTTCTTTTGGAGGGTGGTGCTCTCAGGGTGGAAAGCACAGAGCATGCTCAGGTTTGAGAACTGAGAATTATGGTGTGCTTAACCCTGGTCCAGCCTCAAGAAGGCTGAAGAATCTGCTAACAAAACTTCTCTCTGATAAATTTTTTCATAAACAACAGTGCAGGTAA 1197 0.4286 MGLKIFMASFMVTSILFFLIFLPTRLTIQISSLRPAVNYMSVPKNSKAYPVTFAYLISASKGDVGKLKRLMRVLYHPGNYYLIHMDYGAPEAEHREVAEYVASDPVFGQVGNVWVVGKPNLVTYRGPTMLATTLHAMAMLLRTCQWDWFINLSASDYPLVTQDDLIQVFSELPRDINFIQHSSQLGWKLNKRGKPIIIDPGLYSLNKSEIWWVIKQRTLPTSFKLYTGSAWTILSRSFAEYCIVGWENLPRTLLLYYTNFVSSPEGYFQTVICNSEDYKNTTVNHDLHYITWDNPPKQHPRSLGLKDYRKMVLSSRPFARKFKRNDPVLDKIDRELLKRYHGQFSFGGWCSQGGKHRACSGLRTENYGVLNPGPASRRLKNLLTKLLSDKFFHKQQCR* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00379 398 PANTHER GLYCOSYLTRANSFERASE 9 397 IPR044610 GO:0015020
Lapu1g00379 398 Pfam Core-2/I-Branching enzyme 53 311 IPR003406 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00379 Lapu-Chr1 13774132 13778063 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00379 1 398 Glycosyltransferase AT4G27480 53.885 3.86e-156 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00379 - - gmx:100812712 764.607