Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00367 ATGGGTGGCGTGACCCCAAGGTTCCTCTTCCTCCTCGCCACTCCCCTCCCTCTACTCCGCCGCCACCACCACCGCAGCCTATTCCTCCTCTCTTCCCATCCCCTCCGCCTCTCCTATTCTCCTTCTTCCTTCTCTTTCTCGTCTTCACCTCTCCCACTCAAGGTCAGAGCCTCCCAAGCTTCCTCTCTCACCTCCTCTTCCTGGCCCGAGTACTCCTCTTTCCTCTCTCACATCTCCTCCGCCGGCTATCTCTCCTCCCTCCCCGACGACGCCTTCACCGTCGCTGCCGAACACCTCTCCTACTCCTTCCTCCGCGACGCCACCGCTTGCTTGGCCTTCGCACGCGACCGCCCTAACCTTCTCAGGCTGCTTTCTACGAGAGACATTGCGGCCGTGGTTGAGCACGGCTCCCCCTTTCTCTTCCGCGACGCCGATGATTCCGTCAGGAAGATGAAGTCCTTTCTGTCCAACGGGGACGCCAATGTGTTGGGCACTGATAGAGCAAATACGGTTGACCTAATGAAGTTTTTGCTGAGTTATGCAAGTGATCCATATGTCCCTTCAGAAGGGAACAGTCTCAATAAAAGAAATCTTATTGAATCATCTGTCAGAAATCTCTTTGGTGAACTTTTCAAACTGAGTTATGGTGTGCCTGGATCAAACTCTTTTGATTCAGTGGAAAGTGAAACGGCTGGAAGATTTGGACATACAAAGCCTCCTGGACCAAAAATTGAAATGAAGAGGGGTGATTGGATTTGCCCAAGGTGTAATTTCATGAATTTTGCACGAAACATCAAATGTCTTGAGTGTGAGGAAGCCAGGCCAAAAAGGCAACTAGCTGGAGGTGAATGGGAATGTCCTCAGTGTGATTTCTATAACTACGGGAGGAACATGAGTTGCTTAAGGTGTGATTGCAAGCGACCTGGACAAATATCTTTGGGTGCCACTAATATCATGTCAAATATGGAGTACGAAAATGGAAACAATCCTAATACTTCAGATGTTGATGCTAGGTTAGCTGCTAATGAAGAAAAGGCACAGCGTTGGTTTAAGAAGGTTTCTCAACTAGACAGCAGTGCTGATATTAATAGTGTGATAGCAGATGAAGATTTTCCTGAAATAATGCCGCTGAGGAAAGGAGTTAATAGATTTGTTGTGAGCACAAGAAAGACTCCACTGGAGAGGAGGTTGGCTGATGCTCAATATAAAAGAAACTTGTCCAATTATGACATTCCTGAGATTGAGGATTGTAAAACTGGGGAGCCAATCAAGTCCCATGACAATCTGGATGACATGCTAGGTCGTTCAGCTGGCCTTCCTCAATATGACAATAACACCATAAATGCTAGTGGAAACAGGCAACCTTCATTTGTTAGCAATAGCAATACTTTACATTTTAAAAATGTGCAAGGGAGCTACACTAGTACTGTTCCTCCCAGTCCATTGTCTGCAGATGCACTTGCCCCGAAGTCTGAGAACTTGATAGCAGAGGAGAGCAAAAGTGTGGTATCAGACAATGATATCAGATATAGTTCGGGAGATAGTTCACAACTTTCTAAGAATTCTACCAATATTACTGAAGATAAGGAGAAAGAGCAAGCTGAAAAATCTGAGAAATGGTTTAGAAAGATTGCCGAGCTGAATGATTTTCCAGATATAACAAGTGCAATATCTGATGAGGATTTCCCTGAAATAATGCCCATGCGTAAAGGAGAAAATCGATTTGTCGTTAGCAAGAAAAAAGATCGTTCTTTGACAACACCAGCATATAAGAGACAAGCGGCCATGGAGCAAGCTAGCAAAACCAACTTTGTCCCATTTGTCCCCTTCCCCCCCGATTACTTTGCCAAAAAGGACAAGCCGCAGGCAGATGAAACAGATTCAATGGATAGGTCTAATGATGGTACATCTTCCATATCTGAGATGGCAGAGAAGGCTCTGGAGATATCAGATGATGCTAGAGCTCAACCAGGACAGAGTTCAAAGTTTTCTGAACAGAGCTCAAATAACAATGATTCTATGCGTGGGGCAGGAACCAGTGGAAATTCAAGACAGACTTTCGATCAAGATCATGTTCCAAATTTGACTGGGAGTTCATCCCTAGGTACAGCATCTGAGAACCAGAGTAGTAGAGCAGAGTGGACAAGAAAGAGTTTAGAGGGGTCTGCTGTGAAGGAACCAGATCCTTTGGACATGTCAGAGGAGGCAAAGGCAGAGAGGTGGTTCCGGCGTGTTGCACAGATTAAGGATATATCTGAGCTCAGTCAGATTCCAGATGAAGATTTTCCTTCAATCATGCCTATGCGCAAAGGAGTGAACAGATTTGTTGTAAGCAAGAGGAAAACTCCATTAGAAAGGAGATTGACATCTCAGCAGTACCGAAGAAATCTTCCAACTGTGAGCTCAGATACAAATAAAAACGAAAATGAAGGCAGCTGA 2439 0.4539 MGGVTPRFLFLLATPLPLLRRHHHRSLFLLSSHPLRLSYSPSSFSFSSSPLPLKVRASQASSLTSSSWPEYSSFLSHISSAGYLSSLPDDAFTVAAEHLSYSFLRDATACLAFARDRPNLLRLLSTRDIAAVVEHGSPFLFRDADDSVRKMKSFLSNGDANVLGTDRANTVDLMKFLLSYASDPYVPSEGNSLNKRNLIESSVRNLFGELFKLSYGVPGSNSFDSVESETAGRFGHTKPPGPKIEMKRGDWICPRCNFMNFARNIKCLECEEARPKRQLAGGEWECPQCDFYNYGRNMSCLRCDCKRPGQISLGATNIMSNMEYENGNNPNTSDVDARLAANEEKAQRWFKKVSQLDSSADINSVIADEDFPEIMPLRKGVNRFVVSTRKTPLERRLADAQYKRNLSNYDIPEIEDCKTGEPIKSHDNLDDMLGRSAGLPQYDNNTINASGNRQPSFVSNSNTLHFKNVQGSYTSTVPPSPLSADALAPKSENLIAEESKSVVSDNDIRYSSGDSSQLSKNSTNITEDKEKEQAEKSEKWFRKIAELNDFPDITSAISDEDFPEIMPMRKGENRFVVSKKKDRSLTTPAYKRQAAMEQASKTNFVPFVPFPPDYFAKKDKPQADETDSMDRSNDGTSSISEMAEKALEISDDARAQPGQSSKFSEQSSNNNDSMRGAGTSGNSRQTFDQDHVPNLTGSSSLGTASENQSSRAEWTRKSLEGSAVKEPDPLDMSEEAKAERWFRRVAQIKDISELSQIPDEDFPSIMPMRKGVNRFVVSKRKTPLERRLTSQQYRRNLPTVSSDTNKNENEGS* 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00367 812 MobiDBLite consensus disorder prediction 439 460 - -
Lapu1g00367 812 MobiDBLite consensus disorder prediction 718 735 - -
Lapu1g00367 812 MobiDBLite consensus disorder prediction 498 523 - -
Lapu1g00367 812 Pfam Zn-finger in Ran binding protein and others 282 308 IPR001876 -
Lapu1g00367 812 Pfam Zn-finger in Ran binding protein and others 248 275 IPR001876 -
Lapu1g00367 812 SMART zf_4 249 273 IPR001876 -
Lapu1g00367 812 SMART zf_4 282 306 IPR001876 -
Lapu1g00367 812 MobiDBLite consensus disorder prediction 654 716 - -
Lapu1g00367 812 ProSitePatterns Zinc finger RanBP2-type signature. 284 303 IPR001876 -
Lapu1g00367 812 MobiDBLite consensus disorder prediction 418 460 - -
Lapu1g00367 812 MobiDBLite consensus disorder prediction 789 812 - -
Lapu1g00367 812 MobiDBLite consensus disorder prediction 783 812 - -
Lapu1g00367 812 ProSiteProfiles Zinc finger RanBP2 type profile. 280 309 IPR001876 -
Lapu1g00367 812 ProSiteProfiles Zinc finger RanBP2 type profile. 247 276 IPR001876 -
Lapu1g00367 812 SUPERFAMILY Ran binding protein zinc finger-like 241 276 IPR036443 -
Lapu1g00367 812 PANTHER ZINC FINGER PROTEIN 55 405 - -
Lapu1g00367 812 MobiDBLite consensus disorder prediction 498 534 - -
Lapu1g00367 812 ProSitePatterns Zinc finger RanBP2-type signature. 251 270 IPR001876 -
Lapu1g00367 812 MobiDBLite consensus disorder prediction 613 735 - -
Lapu1g00367 812 Gene3D - 241 277 - -
Lapu1g00367 812 Gene3D - 278 310 - -
Lapu1g00367 812 MobiDBLite consensus disorder prediction 617 631 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00367 Lapu-Chr1 13361142 13365430 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00367 68 313 EF-hand Containing Proteins AT1G55040 34.138 4.02e-41 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00367 - - gmx:100792849 1248.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00367 1 13361142 13365430 Lapu1g00367 1 13361142 13365430 ECH