Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00355 ATGCCTATAGAACATTGGCAGCACCATAGTAGAGGGGTGGAGATGGGAGAAGAGCTAAAGGAGAAGCTTTTGCATCAGCCAAAGAACAATTCTTTGAAAGAGGAAGAGTCTCTCGGGAAAAGGGTATGGGAAGAAAGCAAGAAGATGTGGGTGGTAGCAGGCCCTGCTATATTCACAAGGTTTTCAACTTTTGGTATTTTGGTGGTTAGTCAATCCTTCGTTGGCCATATTGGTTCAACTGAACTAGCTGCATATGCCCTAGTTATGACTGTCCTAGTCAGGTTTGCAAATGGGGTATTGATTGGCATGGCAAGTGCTTTGGAAACTCTTTGTGGTCAAGCATATGGGGCCAGAAAGTATGACATGCTTGGAGTGTATCTTCAAAGATCATGGATAGTGTTGTTCACAGCCTCAATATTCCTTCTTCCTATTTACATCTTCACCACTCCTTTGTTAGAGGCTCTAGGCCAAGACAAAACCATTGCTCAAGTTGCTGGAAGCATTTCTCTCTGGTCAATTGGTATCATATTTTCTTTCTCAGTGTCATTCACCTGCCAAATGTTCCTGCAATCACAGAGCAAGAACAAGATCATTGCCTACCTCGCAGCAGTTTCAATTTCACTCCACCTTTTCCTGTCATGGCTTTTAACTGTTCACTTCAGGTTTGGGCTCAACGGTGCACTCACATCAACACTTTTAGCATATTGGATTCCAAACTTGGGCCAACTTGTGTTTATCATGACCAAGTGCCCTGACACATGGAAAGGCTTCTCTTTCTTGGCCTTCAAAGATCTTTGGTCTGTTATCAAGCTTTCCCTCTCATCTGGAGCTATGTTATGTCTTGAGATCTGGTACAACACAGTTTTGATTCTTCTTACAGGCAACATGAAAAATGCAGAAGTGTCCATCGATGCTCTGGCCATATGCCTCAACATCAGTGGATGGGAAATGATGATAGCCCTCGGTTTCTTTGCTGCTGCTGGTGTTCGGGTTGCAAACGAGCTTGGAAGAGGGAGTTCAAAGGGTGCAAAATTTTCCATTCTTATAACAGTTCTCACATCATTTGTGATTGGCTTCGTGCTATTTGTGATGTTCCTGTTTCTGAGGGAAAGACTTGCTTATATTTTCACTAAAGACTCTGAGGTGGCTAAAGCAGTTGGTGATTTATCGCCATTGCTCTCATTTTCCATCTTGATGAACAGTGTCCAACCCGTCCTCTCTGGAGTTTCTGTGGGAGCTGGGTGGCAAAGCATTGTAGCATATGTAAACATTGGCTGTTATTATCTGATTGGTATTCCTGTTGGAGTGCTGCTTGATAATCTTCTCCATTTGGATGTCAAGGGTATTTGGATTGGAATGTTGTTTGGAACATTTGTTCAAACCATAATGCTTATTACAATCACATTGAAAACAGATTGGGACAAGCAGGTAGAGCTAGCTCGAAAGCGTGTTAACAAATGGACAGTGGTGGAGAACCAAGAATCAAACACTAGACGAAGCATATCTAGCTAA 1512 0.4272 MPIEHWQHHSRGVEMGEELKEKLLHQPKNNSLKEEESLGKRVWEESKKMWVVAGPAIFTRFSTFGILVVSQSFVGHIGSTELAAYALVMTVLVRFANGVLIGMASALETLCGQAYGARKYDMLGVYLQRSWIVLFTASIFLLPIYIFTTPLLEALGQDKTIAQVAGSISLWSIGIIFSFSVSFTCQMFLQSQSKNKIIAYLAAVSISLHLFLSWLLTVHFRFGLNGALTSTLLAYWIPNLGQLVFIMTKCPDTWKGFSFLAFKDLWSVIKLSLSSGAMLCLEIWYNTVLILLTGNMKNAEVSIDALAICLNISGWEMMIALGFFAAAGVRVANELGRGSSKGAKFSILITVLTSFVIGFVLFVMFLFLRERLAYIFTKDSEVAKAVGDLSPLLSFSILMNSVQPVLSGVSVGAGWQSIVAYVNIGCYYLIGIPVGVLLDNLLHLDVKGIWIGMLFGTFVQTIMLITITLKTDWDKQVELARKRVNKWTVVENQESNTRRSISS* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00355 503 CDD MATE_eukaryotic 45 478 IPR045069 GO:0042910|GO:1990961
Lapu1g00355 503 NCBIfam MATE family efflux transporter 55 450 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lapu1g00355 503 Pfam MatE 55 215 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lapu1g00355 503 Pfam MatE 277 436 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lapu1g00355 503 PANTHER MULTIDRUG RESISTANCE PROTEIN 38 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00355 Lapu-Chr1 13103325 13108351 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00355 K03327 - gmx:100775619 848.58