Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00354 ATGAAGGAGGATCTAAGGCAGAAGCTGTTGAGCAAAGAGAGAAGAGGAGATGAAGAGGAAGAGGAGTTATCGTTGTGGAAGAGGGTGTGGAATGAGAGCAAGTTGATGTGGATAGTGGCAGCACCCGCCATATGCACTAGGTTCACTACCTTTGGTCTCAATGTTATAAGCCAATCCTTTGTTGGCCATATTGGCTCAAGGGAATTGGCTGCTTTTGCTCTCGTTTACACCGTTCTCGTTAGGTTCGCCAATGGTGTTCTCTTAGGGATGGCGAGTGCATTGTCAACACTTTGTGGACAAGCATTTGGTGCAAAAGAATATAACATGATGGGAGTGTATCTTCAAAGATCATGGATAGTTTTGTTCTTAACCGCACTCTGTCTTCTTCCGGTGTTCTTCCTCACAACCCCAATTTTAACGCTCTTAGGCCAAGAGGAGAGCATAGCACAAGTGGCGGGAACCATTTCTGTTTGGTCAATTCCTATCATGTTTGCCTTCATTGTCTCATTCACTTGTCAGACTTTCCTGCAATCTCAGAGCAAGAATGTGATCATTGCATTCTTGGCAGTTCTTTCGATAGTGATTCATGTGTTTCTCTCCTGGCTTTTGACAATGAAGTTCAAATTCGGGATTCCTGGTGCAATGATTTCAACAATTTTGGCATTCTGGATTCCCAACATTGGTCAACTCATATTTGTCACATGTGGGTGGTGCTCCGATACATGGAAAGGTTTCTCCTTTTTGGCGTTCAAAGACCTCTGGCCTGTTGTCAAGATGTCCCTCTCAGCTGGTGCCATGATATGTCTTGAGATCTGGTACAACACCATATTAGTTCTTTTGACCGGTAACATGAAAAATGCAGAGGTTGCAATTGATGCTCTATCCATATGTCTCAACATCAATGGATGGGAAATGATGATAGCACTCGGTTTCATGGCTGCAGCAAGTGTTCGAGTAGCAAATGAACTTGGAAAAGGAAGTGCCAAAGCTGCAAAGTTCTCAATACTTGTGTCTGTGCTCACATCATTGACCATAGGATTCTTTCTGTTCTTATTCTTCTTGTTTTTCAGAGAAAGACTTGCTTATATATTTACCTCAGATAAAGATGTGGCCGTTGCTGTTGGGGATTTGTCACCTTTGTTATCAGTCTCTATTTTACTAAACAGTGTTCAACCAGTACTCTCAGGAGTGGCTATAGGAGCAGGGTGGCAAAGCATCGTAGCATACGTGAATTTGGCGTGTTATTACATCATAGGTATTCCTGTAGGTCTCGTACTTAGTAACTTTCTCGATATGCAAGTCAAGGGAATCTGGATTGGAATGTTGATTGGAACATTCATTCAAACATTAGTGCTAACTGTAATTACATACAAAACTAATTGGGACGAGCAGGTTACCATTGCTCAAAAAAGTATTAGCAGATGGGCGAAGATGGACAATGGTGATGAAGAAAATGAAAGAGAGAGAAAATATGTTAGCTAA 1482 0.4197 MKEDLRQKLLSKERRGDEEEEELSLWKRVWNESKLMWIVAAPAICTRFTTFGLNVISQSFVGHIGSRELAAFALVYTVLVRFANGVLLGMASALSTLCGQAFGAKEYNMMGVYLQRSWIVLFLTALCLLPVFFLTTPILTLLGQEESIAQVAGTISVWSIPIMFAFIVSFTCQTFLQSQSKNVIIAFLAVLSIVIHVFLSWLLTMKFKFGIPGAMISTILAFWIPNIGQLIFVTCGWCSDTWKGFSFLAFKDLWPVVKMSLSAGAMICLEIWYNTILVLLTGNMKNAEVAIDALSICLNINGWEMMIALGFMAAASVRVANELGKGSAKAAKFSILVSVLTSLTIGFFLFLFFLFFRERLAYIFTSDKDVAVAVGDLSPLLSVSILLNSVQPVLSGVAIGAGWQSIVAYVNLACYYIIGIPVGLVLSNFLDMQVKGIWIGMLIGTFIQTLVLTVITYKTNWDEQVTIAQKSISRWAKMDNGDEENERERKYVS* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00354 493 CDD MATE_eukaryotic 32 465 IPR045069 GO:0042910|GO:1990961
Lapu1g00354 493 PANTHER MULTIDRUG RESISTANCE PROTEIN 25 461 - -
Lapu1g00354 493 Coils Coil 2 22 - -
Lapu1g00354 493 Pfam MatE 42 202 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lapu1g00354 493 Pfam MatE 265 424 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lapu1g00354 493 NCBIfam MATE family efflux transporter 42 438 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00354 Lapu-Chr1 13052569 13057252 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00354 K03327 - gmx:100792122 836.639