Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00348 ATGGAGGGGGATCAGGAGCAGAGGTTGCTGATAAAAGAGAAAACATCAGAAGAGGAGTTATCATTGGTGAAGAGGGTGTGGCAAGAGAGCAAGTTGATGTGGGTGGTGGCAGGACCTGCCATATTCACTAGGTTCTCAACCTTTGGTCTCAATATTATAAGCCAGGCTTATGTTGGACATATTGGTTCAAAAGAACTTGCTGCTTTTTCTCTTGTCTACACTGTTCTCGTACGCTTTGCCAATGGTATTCTGTTAGGAATGGCGAGTGCATTGGCAACCCTTTGTGGACAAGCATTCGGTGCAAAAGAACATGCCATGATGGGAGTGTATCTCCAAAGATCATGGATAGTTTTGTTCTCTACTGCAGTCTGTCTTCTTCCTTTGTTCTTCTTCACAAGCCAAATATTGAGGCTCCTAGGCCAAGATGAGAGCATAGCCCAAGTGGCAGGAATAATTTCTCTTTGGACAATTCCTATCTTATTTGCTTTTATTGTCTCCTTCACTACCCAAATGTTTCTGGAATCTCAAAGCAGGAATACCCTTATTGCATTCGTGGCAGCTTTGTCGATAGTTATTCATCTTTCACTGTCTTGGCTATTGACAATAAAATTACAGTTTGGGCTCGCTGGTGCAATGATTTCAACGGTTTTGGCATACTGGATTCCAAATAGTGGTCAACTAATATATATTACCTGTGGTTGGTGCTCTGATACATGGAAAGGTTTCTCATTTTTAGCATTCAAAGATCTTTTGCCTGTTGTTAAGCTTTCCCTATCATCCGGGGTCATGTTATGTCTTGAGCTGTGGTACAACACAATATTGGTCCTTCTAACGGGCAACATGAAAAATGCAGAGGTCCAAATTGATGCTTTATCTATATGCCTAAATATTACTGGATGGGAAATGATGATATCAGTTGGTTTCATGGCCGCTGCAAGTGTTCGAGTGGCAAATGAGCTTGGAAAAGGAGACTCCAAAGCTGCAAAGTTCGCTATACTTGTATCAGTGTCTACATCCTTAGCCATTGGAATCATTCTCTTCATATTTTTCTTATTTTTAAGGGAAAAGCTTGCCTACGTATTTACCACTAGTAAAGAGGTGGTCGATGCTGTTGGGGACTTGTCACCTTTGTTGGCATTCTCCATTCTTCTCAACAGTGTTCAACCTGTACTCTCAGGTGTTGCAGTTGGAGCAGGGTGGCAAAGCATTGTAGCATATGTGAACATAGGGTGTTATTATGTCATAGGTATTCCTGCAGGAGTGATGCTTGGTAATGTTATCCATTTGCAAGTCAAGGGTATTTGGATTGGAATGTTGCTTGGAACATTTATTCAAACAGTAGTGCTAACTATAATAACCTACAAAACTAATTGGGACGACCAGGTGACTAGAACACGTAATAGTATTGACAAGTGGTCCAAGATGAATCCTGATCGTGAAAGAATTACATCAGATAATTAG 1461 0.4107 MEGDQEQRLLIKEKTSEEELSLVKRVWQESKLMWVVAGPAIFTRFSTFGLNIISQAYVGHIGSKELAAFSLVYTVLVRFANGILLGMASALATLCGQAFGAKEHAMMGVYLQRSWIVLFSTAVCLLPLFFFTSQILRLLGQDESIAQVAGIISLWTIPILFAFIVSFTTQMFLESQSRNTLIAFVAALSIVIHLSLSWLLTIKLQFGLAGAMISTVLAYWIPNSGQLIYITCGWCSDTWKGFSFLAFKDLLPVVKLSLSSGVMLCLELWYNTILVLLTGNMKNAEVQIDALSICLNITGWEMMISVGFMAAASVRVANELGKGDSKAAKFAILVSVSTSLAIGIILFIFFLFLREKLAYVFTTSKEVVDAVGDLSPLLAFSILLNSVQPVLSGVAVGAGWQSIVAYVNIGCYYVIGIPAGVMLGNVIHLQVKGIWIGMLLGTFIQTVVLTIITYKTNWDDQVTRTRNSIDKWSKMNPDRERITSDN* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00348 486 Pfam MatE 39 199 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lapu1g00348 486 Pfam MatE 262 421 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lapu1g00348 486 NCBIfam MATE family efflux transporter 39 435 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lapu1g00348 486 PANTHER MULTIDRUG RESISTANCE PROTEIN 22 458 - -
Lapu1g00348 486 CDD MATE_eukaryotic 29 464 IPR045069 GO:0042910|GO:1990961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00348 Lapu-Chr1 12887009 12891002 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00348 K03327 - gmx:100789487 767.689
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00348 1 12887009 12891002 Lapu1g00348 1 12887009 12891002 ECH