Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00347 ATGGAGGGGAATCTAAAGCAGAAGCTGCTGAACAGAGAGATAACTTCAGAGCAAGATAAAGAAGAAGAACCATCGTTGGTGAAGAGGGTGTGGAAAGAGAGCAAGTTGATGTGGATAGTGGCAGCGCCAGCCATATTCACCAGGTTCTCCACCTTTGGTCTCAATATTATAAGTCAAGCTTTTGTTGGTCATATTGGCCCAAGAGAACTTGCTGCTTTTGCCCTTGTCTTCACTGTTCTCATACGCTTCGCCAATGGTGTTCTGTTGGGAATGGCGAGTGCATTATCAACACTTTGCGGACAAGCATTTGGTGCAAAAGAATATAGCATGATGGGAGTGTATCTTCAAAGGTCATGGATAGTTTTGTTCTTAACTGCACTTGTTCTTGTTCCGGTGTTCATCTTCACAAGCCCAATTTTGACGCTTTTAGGTCAAGATGAGAGCATAGCACAAGTGGCAGGAACCATTTCTATCTGGTCAATTCCTATAATGTTTTCTTTCATTTTCTCATTCACCTGCCAGACATTCCTGCAATCTCAAAGCAAGAACGTCATCATTGCATTTTTGGCAGCTTTTGCGATAGTGATTCATGTGTTTCTCTCCTGGCTTTTGACAATGAATTTCAAGTTTGGGATTCCTGGTGCAATGATTTCAACAATTTTGGCATTCTGGATTCCCAACATTGGTCAACTCATATTTGTCACATGTGGGTGGTGCTCCGATACATGGAAAGGTTTCTCCTCTTTGGCATTCAAAGACCTGTGGCCTGTTGTCAAGATGTCCCTTTCAGCTGGTGCCATGTTATGTCTTGAGCTCTGGTACAACACAATATTGGTTCTGTTAACGGGTAACATGGAAAATGCAGAGGTCCAAATCGATGCTCTTTCTATATGCATCAATGTCAACGGATGGGAAATGATGATATCACTTGGTTTCATGGCTGCTGCAAGTGTTCGAGTGGCAAACGAGCTTGGAAAAGGAAGCTCCAAAGCTGCAAAGTTTTCTATAGTTGTGACAGTGCTTACATCCTTTTCAATTGGGTTAATCTTGTTTGTACTTTTCTTACTTTTAAGAGAAAAAATAGCCTATGTATTTACTACAAGTGAAGACGTGGCTAATGCTGTTGGGGATTTGTCACCTTTGTTGGCATTTTCTTTGTTACTAAATAGTGTTCAACCAGTGCTCTCAGGGGTTGCTATTGGAGCAGGGTGGCAGAGCAGTGTAGCATATGTGAACATAGGGTGTTACTATGTCATAGGTATTCCTGTTGGAATATTACTTGGTAACGTTTTCCACTTGCAAGTTAAGGGTGTTTGGATTGGAATGTTGTTTGGGACACTAATTCAAACTATAGTCCTAATCATATTAACCTACAGAACTAATTGGGATGAACAGGTAATGATAGCCCGTATCCGTATTAATAGGTGGTCTAAAGTGAATGTTGATCATGAAACAATTGGATCAGATAATTAG 1473 0.4107 MEGNLKQKLLNREITSEQDKEEEPSLVKRVWKESKLMWIVAAPAIFTRFSTFGLNIISQAFVGHIGPRELAAFALVFTVLIRFANGVLLGMASALSTLCGQAFGAKEYSMMGVYLQRSWIVLFLTALVLVPVFIFTSPILTLLGQDESIAQVAGTISIWSIPIMFSFIFSFTCQTFLQSQSKNVIIAFLAAFAIVIHVFLSWLLTMNFKFGIPGAMISTILAFWIPNIGQLIFVTCGWCSDTWKGFSSLAFKDLWPVVKMSLSAGAMLCLELWYNTILVLLTGNMENAEVQIDALSICINVNGWEMMISLGFMAAASVRVANELGKGSSKAAKFSIVVTVLTSFSIGLILFVLFLLLREKIAYVFTTSEDVANAVGDLSPLLAFSLLLNSVQPVLSGVAIGAGWQSSVAYVNIGCYYVIGIPVGILLGNVFHLQVKGVWIGMLFGTLIQTIVLIILTYRTNWDEQVMIARIRINRWSKVNVDHETIGSDN* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00347 490 CDD MATE_eukaryotic 33 466 IPR045069 GO:0042910|GO:1990961
Lapu1g00347 490 NCBIfam MATE family efflux transporter 43 439 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lapu1g00347 490 Pfam MatE 266 425 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lapu1g00347 490 Pfam MatE 43 203 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lapu1g00347 490 PANTHER MULTIDRUG RESISTANCE PROTEIN 26 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00347 Lapu-Chr1 12833156 12836813 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00347 K03327 - gmx:100777237 780.785