Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00345 ATGAGCAACGACATATTTGATGCACAGTTGTTAGCTGAGAAGTTGTTGAAACTCAACAATTCACAACAAAGCATTCAATCATTGTCCCTTTGGTGTATCCCTCACCGGAAGAGAGCAAAAGAAATAGTTGAAACTTGGGATAAATTATTCAATGCTTCCTCTCAGAAAGAGCAGCGTATCTCTTTTCTACACTTGGCTAATGACATCTTGCAAAATAGTAGACGAAAGGGTAGTGAGTTTGTCAATGAATTCTGGAAAGTTCTTCCAGAAGCTCTAAGGCGTGTTTGTGAAAGTGATGACTCGGGAAGGAAAGCAGTGACCAGACTAATTGATGTATGGGAGGAGAGGAAGGTTTTTGGTTCACGAGGTCAAGGTCTTAGGGATGAAATAATACTGGGTAAGATTCCCCCTCCATCTGCAAGCAATGGAAAGAGTTCAAATTCTATCAAGATAGCAAAGAAGGATGCCCACGTGAGAATTAAATTGGCTGTTGGATGTTTGCCAGAGAAAATAGTATCTGCATTTCAGCCTGTTCTTGATGAACATCTTAATGAAGAAGCTGCTTTAAACAACTGCAGTGCTGCTGTGCATAGTGTGGGTAAAGTTGTGGAAGATGTTGAAAATACATTGGCTCAAGGAAACCAGCTGGGATCCACTTTGGTGAATGACTTACTCAATGACTTGCAAGAGCAGGAAAAAAAGCTTAAGCAATATATGGAGCAACTAGAAAATGCTGAGGCTGCAAGGGATTCGTTGCTTTCTCAGCTTAAACGTGCACTTCAGGAACAAGAATCAAGGCAAGAGCTTGTTCACACCCAGTTGCTTGTTGCACGAGGGCAGATCGAGAAAGCAGTCGATATTAAGAAACGGCTTAACCAAGCAGCAGAAGCTGCAGATCCATCTCAGCCTGCATTCGCTCAATCAGTACCATTTGCACCTTTCCAAACTACAGAAGATGAGAACAAGAAGGCGAAGGCAGCGGCAGCTGCCGTTGCTGCTAAGCTTGCTGCATCTGCATCCTCTGCCCAGATGCTTACATCTGTTCTTTCTTCTTTTGTAGCTGAAGAAGCTGCCTCCTTGAATGGTAGCTTAAATTCCACAGGATTTTCATCAGGATTACCTATTTTCAACCCAGAGAAAAGACCCAAACTTGAAAAACCAACGCCTGTTCCTGATGTTAACAGTTCTGAAATGATCAGCTCTTCCTTTTATGCTGCAACCCTACAACAGCCATCACTGGCAAATGTACCACTTGCACCGTCAGCTGGCATGCAAACTGGGCCTCAAGTCAATCAATTACAAGCTGCATTTGCTTCAGCACCCCCTCCCCCATCTCATTCTTCAGCAAATCAACCATCAAACCAATATGTCCAATCAACTGGTTTGATGGCTGGGGGAATTCCTTATGGATATGGTCCAAATAGCCTTCCACCTCCACCTCCTTTGCCTCCACATGTGGCTATGGGGTTGTCAATGCCTGGTAATCAATCGGCACAGCAGCAACAGCAGTCTCCTCCTGGGGGATATTACAGGCCACCTGGCATAGGGTTTTATGGGCAAAGCCACCCATCAACACCACCACCGGTACCTAGGCAGTGA 1599 0.4459 MSNDIFDAQLLAEKLLKLNNSQQSIQSLSLWCIPHRKRAKEIVETWDKLFNASSQKEQRISFLHLANDILQNSRRKGSEFVNEFWKVLPEALRRVCESDDSGRKAVTRLIDVWEERKVFGSRGQGLRDEIILGKIPPPSASNGKSSNSIKIAKKDAHVRIKLAVGCLPEKIVSAFQPVLDEHLNEEAALNNCSAAVHSVGKVVEDVENTLAQGNQLGSTLVNDLLNDLQEQEKKLKQYMEQLENAEAARDSLLSQLKRALQEQESRQELVHTQLLVARGQIEKAVDIKKRLNQAAEAADPSQPAFAQSVPFAPFQTTEDENKKAKAAAAAVAAKLAASASSAQMLTSVLSSFVAEEAASLNGSLNSTGFSSGLPIFNPEKRPKLEKPTPVPDVNSSEMISSSFYAATLQQPSLANVPLAPSAGMQTGPQVNQLQAAFASAPPPPSHSSANQPSNQYVQSTGLMAGGIPYGYGPNSLPPPPPLPPHVAMGLSMPGNQSAQQQQQSPPGGYYRPPGIGFYGQSHPSTPPPVPRQ* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00345 532 ProSiteProfiles CID domain profile. 3 135 IPR006569 -
Lapu1g00345 532 CDD CID_RPRD_like 9 130 - -
Lapu1g00345 532 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN 7 529 - -
Lapu1g00345 532 Gene3D - 5 131 IPR008942 -
Lapu1g00345 532 MobiDBLite consensus disorder prediction 492 507 - -
Lapu1g00345 532 FunFam ENTH/VHS family protein isoform 1 3 131 - -
Lapu1g00345 532 MobiDBLite consensus disorder prediction 468 532 - -
Lapu1g00345 532 Coils Coil 221 262 - -
Lapu1g00345 532 SUPERFAMILY ENTH/VHS domain 14 118 IPR008942 -
Lapu1g00345 532 MobiDBLite consensus disorder prediction 472 487 - -
Lapu1g00345 532 SMART 558neu5 10 131 IPR006569 -
Lapu1g00345 532 Pfam CID domain 10 121 IPR006569 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00345 Lapu-Chr1 12752400 12780212 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00345 K15559 - gmx:100814308 714.146