Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00330 ATGGCGTCCCAAATTATCCGTGAGTGGTCTGGAATCAATACATTCGCTCCTGCTACCCAGACTAAGTTGCTTGAGCTCTTGGGAAAGCTTAAACAAGAGAATGTGAACTCCTTGACTATACTCGTGATGGGAAAAGGTGGTGTTGGAAAATCTTCAACTGTCAACTCCATCATTGGGGAAAGAGTGGTTTCGATCAGTCCTTTCCAGTCGGAAGGGCCAAGACCCGTGATGGTGTCACGATCAAGGGCTGGTTTTACATTGAACATTATTGACACTCCTGGTCTCATTGAAGGGGGATACATCAATGATATGGCACTTGATATAATAAAACGTTTCCTTCTGAACAAGACCATAGATGTGCTGCTTTATGTGGATCGTTTGGATGTGTATAGAGTGGACAACTTGGATAAATTAGTTGCCAAAGCTATAACAGATAGTTTTGGCAAAGGAATATGGAACAAGGCTATAGTAGCACTCACACATGCGCAGTTCTCTCCACCAGATGGATTGCCTTATGATGACTTCTTCTCTCAAAGATCTGAGGCTCTCTTGAGGGTTCTTAGGTCAGGTGCCAAGATAAAGAAAGAAGCCTTTCAGGCTCTTTCTATGCCTGTTGTTTTGGTTGAGAACAGTGGGAGATGCAATAAAAATGACAGCGATGAAAAGGTTCTTCCAAATGGGACTGCTTGGATTCCCCATCTAGTCCAAACAATCACAGAAATCGCATTGAACAAAAGTGTGTCTATTCATGTTGACAAGAATTTGATTGAAGGCCCAAATCCGAATCAAAGAGGAAAATTATGGATTCCTCTCGTGTTTGCTCTCCAATATTTCCTTGTCATGAAGCCAATAAAAGGACTGATCGAGAGGGACATTGAAAATGAGAGGAAGCCAGCCTGGGAGAGACGTGATGCCGCATTTCGGAAGAGAGATTTTTATTAG 942 0.4268 MASQIIREWSGINTFAPATQTKLLELLGKLKQENVNSLTILVMGKGGVGKSSTVNSIIGERVVSISPFQSEGPRPVMVSRSRAGFTLNIIDTPGLIEGGYINDMALDIIKRFLLNKTIDVLLYVDRLDVYRVDNLDKLVAKAITDSFGKGIWNKAIVALTHAQFSPPDGLPYDDFFSQRSEALLRVLRSGAKIKKEAFQALSMPVVLVENSGRCNKNDSDEKVLPNGTAWIPHLVQTITEIALNKSVSIHVDKNLIEGPNPNQRGKLWIPLVFALQYFLVMKPIKGLIERDIENERKPAWERRDAAFRKRDFY* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00330 313 PANTHER GTPASE, IMAP FAMILY MEMBER-RELATED 37 213 IPR045058 -
Lapu1g00330 313 NCBIfam GTP-binding protein 1 309 IPR005688 GO:0006886|GO:0009707|GO:0015450
Lapu1g00330 313 PIRSF Toc33/toc34 1 309 IPR005688 GO:0006886|GO:0009707|GO:0015450
Lapu1g00330 313 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 257 IPR027417 -
Lapu1g00330 313 CDD Toc34_like 7 252 - -
Lapu1g00330 313 ProSiteProfiles AIG1-type G domain profile. 35 259 IPR006703 GO:0005525
Lapu1g00330 313 Pfam AIG1 family 38 227 IPR006703 GO:0005525
Lapu1g00330 313 Gene3D - 2 268 IPR027417 -
Lapu1g00330 313 FunFam Translocase of chloroplast 2 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00330 Lapu-Chr1 12487536 12493767 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00330 - - gmx:100782594 578.556