Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00316 ATGGGTTCACTCAAGGCCTTATGCAGTGTTTCTTGGCTCCAATTGTTCATAGTTCTTTGTCTTGTCTTCCAATGCTTTGCTACTAAAAGACGTAATGACCTGAGAACAACTCTAGTAGTAGATGCTTCTGATGCAACTGGAAGGCCAATACCAGAGACACTTTTTGGCATATTCTTTGAGGAGATCAATCATGCTGGAGCTGGGGGATTGTGGGCTGAGCTTGTGAGCAACAGAGGATTTGAAGCTGGGGGCTCTAACACTCCTTCAAATATTGATCCTTGGACAATGATTGGAAATGAGTCATCAATAATTGTTGAAACTGATCGTACCTCTTGCTTTGACCGTAATAAGGTTGCACTTCGATTGGAGGTGTTATGTGACAGTGAAGGTGACAACATTTGCCCAGCTGATGGTGTTGGTGTTTATAACCCTGGTTTCTGGGGCATGAATATTGAGCAAGGAAAGAAATACAAAGTGATCTTGTATGTTCGTTCAACTGAATCACTCAATCTAACAGTTTCGTTGATGGGATCAAACGGTGTAGGAAACTTGGCTTCATCTGCTATCACGGGAGATGATTTTTCAAACTGGACAAAGGTGGAGATTTTATTGGTTGCCAAGGCAACGGATCATAACTCAAGACTTCAATTAACGACCACCACCAAAGGTGTGATATGGTTGGACCAAGTGTCTGCTATGCCACTGGACACATACAAGGGACATGGCTTCCGAACTGAACTTTTTGAAATGCTGACAGCTTTGAAACCCAGATTTATTAGATTTCCGGGTGGTTGTTTTGTTGAAGGAGAATGGTTAAGAAATGCATTTCGATGGAAAGCAACTGTTGGACCGTGGGAAGAGAGACCTGGGCACTTTGGTGATGTTTGGATGTACTGGACTGATGATGGACTTGGCTATTTTGAGTTTCTCCAACTTGCTGAGGACTTGGGGGCTTTACCAATATGGGTATTTAATAATGGTGTCAGCCATAATGATGAAGTAGATACATCTGCGGTCTTACCCCTTGTGCAAGAAGCCCTTGATGGAATTGAGTTTGCAAGAGGGGATCCCACTTCAAAATGGGGTTCACTTAGAGCTGCTATGGGACACCCTGAGCCATTTGACCTAAGATATGTTGCCGTTGGGAATGAAGATTGTGGAAAGCCAAAATATCGAGGAAACTACCTGAAGTTCTATCATGCTATAAGAAGTGCTTATCCAGATATCCAAATTATCTCAAACTGTGATGGTTCTTCTCGACCTTTAGATCATCCAGCTGATATGTATGATTATCATGTTTATACAAATGCGAATGACATGTTTTCTAGAGCTAACACATTTGATCGCACATCACGAAATGGTCCAAAGGCTTTTGTAAGTGAGTATGCTGTGACTGGAAAAGATGCTGGAACAGGAAGCCTTTTGGCAGCCCTAGCTGAAGCTGGGTTCCTTATTGGACTTGAAAAGAACAGTGATGTTATCGAAATGGTCAGCTATGCTCCACTCTTTGTTAATGCCAATGATAGGAGGTGGAACCCAGATGCAATCGTGTTCAACTCCTTCCAGGCCTATGGAACTCCTAGCTACTGGGTGCAACTATTTTTCTCAGAGTCAAGTGGAGCAACACTTCTAAATTCATCACTCCAATCGAATTCCTCAAATTCAGTCGTTGCATCAGCAATAACATTTCAAAGTTCTGTTGATAAGAAAAATTATATACGAATAAAGGTTGTGAACTTTGGCACCAGCGCAGTGAACCTCAAAATCTCTCTTGATGGACTAGAACCAAATTCATTACAGTTATCTGGGTCAACGAAGACTGTGCTTACATCTGGAAATGTAATGGATGAGAACTCCTTCTCACAGCCAAAGAAGGTGGTGCCAATCCAGAGTGGACTTCAGAATGTTGGGAAGGACTTGAATGTAACAGTCCCTCCACGTTCTTTCACATCATTTGATTTGCTGAAAGAATCCAGTAATCTGAAGATGAAAGGGAGTGATTCTTCTACTAGGTCTTCTATTTAA 2025 0.4202 MGSLKALCSVSWLQLFIVLCLVFQCFATKRRNDLRTTLVVDASDATGRPIPETLFGIFFEEINHAGAGGLWAELVSNRGFEAGGSNTPSNIDPWTMIGNESSIIVETDRTSCFDRNKVALRLEVLCDSEGDNICPADGVGVYNPGFWGMNIEQGKKYKVILYVRSTESLNLTVSLMGSNGVGNLASSAITGDDFSNWTKVEILLVAKATDHNSRLQLTTTTKGVIWLDQVSAMPLDTYKGHGFRTELFEMLTALKPRFIRFPGGCFVEGEWLRNAFRWKATVGPWEERPGHFGDVWMYWTDDGLGYFEFLQLAEDLGALPIWVFNNGVSHNDEVDTSAVLPLVQEALDGIEFARGDPTSKWGSLRAAMGHPEPFDLRYVAVGNEDCGKPKYRGNYLKFYHAIRSAYPDIQIISNCDGSSRPLDHPADMYDYHVYTNANDMFSRANTFDRTSRNGPKAFVSEYAVTGKDAGTGSLLAALAEAGFLIGLEKNSDVIEMVSYAPLFVNANDRRWNPDAIVFNSFQAYGTPSYWVQLFFSESSGATLLNSSLQSNSSNSVVASAITFQSSVDKKNYIRIKVVNFGTSAVNLKISLDGLEPNSLQLSGSTKTVLTSGNVMDENSFSQPKKVVPIQSGLQNVGKDLNVTVPPRSFTSFDLLKESSNLKMKGSDSSTRSSI* 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00316 674 FunFam Alpha-L-arabinofuranosidase 1 230 536 - -
Lapu1g00316 674 Pfam Alpha-L-arabinofuranosidase C-terminal domain 461 648 IPR010720 GO:0046373|GO:0046556
Lapu1g00316 674 FunFam Alpha-L-arabinofuranosidase 1 536 655 - -
Lapu1g00316 674 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1 8 661 - -
Lapu1g00316 674 Gene3D - 537 654 IPR013780 -
Lapu1g00316 674 SMART alpha_l_af_c 460 648 IPR010720 GO:0046373|GO:0046556
Lapu1g00316 674 SUPERFAMILY Glycosyl hydrolase domain 526 652 - -
Lapu1g00316 674 Gene3D Glycosidases 217 536 - -
Lapu1g00316 674 FunFam Putative alpha-L-arabinofuranosidase family protein 71 229 - -
Lapu1g00316 674 SUPERFAMILY (Trans)glycosidases 212 543 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00316 Lapu-Chr1 12146850 12157479 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00316 1 671 Glycoside Hydrolase AT3G10740 69.527 0.0 983
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00316 K01209 - gmx:100787207 1245.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00316 1 12146850 12157479 Lapu1g00316 1 12146850 12157479 ECH