Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00310 ATGGCTTCCTTTCCTCCTCCTGGTTCACTCACTCTCTGCGAACTCAATCGTGAACTAATCACCGTGGAGGCTCTCTCCGACGATCGAGCTAACCAAACCTACGGAAAAATCCTCGGATCGGTGTTCAGTCCCGTTCCCTTTCACTCTCTGGAGATCGACGCTTCCGATCAGGAAGGAGCAGCGACGACGGCGAACGCCGCCGGAGAAAGCCTTCAGACGAAAGGTCCGGTGGCACTCTTGCAAGGGCTTGTGAACACCTACCTCGGACGCCTTTTTTACCCTAACGATGTGCATTTGTTGCCGGAGGTGGATCTCCAAGGAGTAAGCTGGCACCCTAATAAGCATATAATTGCTTTTATTTCTTCCCCAACACAAGTTTTGGTTCGTGATTATCAAGAGTCTGAGGGGAAGGATCCGAGTATTTTGGTGAATGAGTCACAGAGAGACGTTAGGGTGCTGGAGTGGAGGCCCAATGGTGGGAAAATGCTTGCTGTGGGTTGCAAGGGTGGAATTTGCATGTGGGCTGCTTCTTATCCTGGAAATGCTGCATCTGTTAGATCTGGTGCTGCTTCTTTTCTAGGAAGTTTATCTAGAAGCTCAGGAAATCGGTATATCCTGGTCGATTTTCTCCGTAGTGCACATGATGAGCATATTAGCGCTCTTACTTGGAGCCCGGATGGAAGATACTTAGTATCTGCTTCATATGAAAGCTCCTCATTCACAGTGTGGGATTTTGCTCAAGGTGTGGGGACACCCATTCGACGTGGATTAGGTGGCATATCAGTGCTGAAGTGGTCACCTACTGGAGATTACTTCTTTGCTTCAAAATTTGATGGAACATTTTATCTTTGGGAGACAAACACATGGACATCAGAACAATGGTCATCAACAAGTGGTTTTGTCAAGGGTGCAACATGGGATCCAGATGGGCGTATGATTCTTCTTGCATTTTCTGAATCATCAACTTTGGGATCTGTTCACTTTGCATCAAAGCCTCCCTCATTAGATGCTCATTTGTTACCTGTTGATTTGCCGGAAATATTGTCATTGACAGGCAGTCAGGGAATTGAAAAGATAGCATGGGATAATTCAGGGGAACGATTGGCTGTGTCTTTTAAAGGTGGAGATGACATGTACAGGGGACTGATCGCCATATATGATACAAGAAGGACACCTCTTATATCTACGTCTTTAATTGGATTTATAAGAGGACCTGGAGACAGTCCGACGCCAATCTCATTTTCATTTCACGCAAAGTTTAAGCAGGGACCATTGCTTTCTGTGTGCTGGAGCAGTGGGTTTTGTTGCACTTATCCCCTCTTGTTTCGTTCCCATATGCTTCCATGA 1347 0.464 MASFPPPGSLTLCELNRELITVEALSDDRANQTYGKILGSVFSPVPFHSLEIDASDQEGAATTANAAGESLQTKGPVALLQGLVNTYLGRLFYPNDVHLLPEVDLQGVSWHPNKHIIAFISSPTQVLVRDYQESEGKDPSILVNESQRDVRVLEWRPNGGKMLAVGCKGGICMWAASYPGNAASVRSGAASFLGSLSRSSGNRYILVDFLRSAHDEHISALTWSPDGRYLVSASYESSSFTVWDFAQGVGTPIRRGLGGISVLKWSPTGDYFFASKFDGTFYLWETNTWTSEQWSSTSGFVKGATWDPDGRMILLAFSESSTLGSVHFASKPPSLDAHLLPVDLPEILSLTGSQGIEKIAWDNSGERLAVSFKGGDDMYRGLIAIYDTRRTPLISTSLIGFIRGPGDSPTPISFSFHAKFKQGPLLSVCWSSGFCCTYPLLFRSHMLP* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00310 448 FunFam Aladin isoform A 210 437 - -
Lapu1g00310 448 Gene3D - 101 252 IPR015943 GO:0005515
Lapu1g00310 448 Pfam WD domain, G-beta repeat 212 244 IPR001680 GO:0005515
Lapu1g00310 448 Gene3D - 253 437 IPR015943 GO:0005515
Lapu1g00310 448 SMART WD40_4 246 285 IPR001680 GO:0005515
Lapu1g00310 448 SMART WD40_4 203 244 IPR001680 GO:0005515
Lapu1g00310 448 SMART WD40_4 343 387 IPR001680 GO:0005515
Lapu1g00310 448 SMART WD40_4 136 175 IPR001680 GO:0005515
Lapu1g00310 448 PANTHER ALADIN/ADRACALIN/AAAS 2 444 IPR045139 -
Lapu1g00310 448 Pfam Anaphase-promoting complex subunit 4 WD40 domain 108 182 IPR024977 -
Lapu1g00310 448 SUPERFAMILY DPP6 N-terminal domain-like 106 415 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00310 K14320 - gmx:100808599 857.825