Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00309 ATGAATCTCTTGAATAGTCCCAGACACAGGTTCCTCTCATCACCCTTTACCCTGTTCACCCAACGACGATGGAAGAAACCCACCGTTTCCGCCCAAACCCGTTTGGAAGACAGAGTACGGGACCCCCACTTCGACAAACTCATGGCTCACCTCAAAAGACTCTACCTTGTCCTCGAAATCCACCACCTCATGTCCACCCGCAAGCGCGCTCCCTTCGTCTCCCTCGCCCTCATGTCCCGCTGGAGAAACATCCTCGGACTCAACGTCCCTGTGGGCCACTTCCTCCACAAATATCCTCACGTGTTCCACGTGTTTGTTCACTCTCTCAGGAGGAACAGGTGCTGCAGGGTCACAAAAAAGATGAAAGAGTTGATCTTGCTTGAAGGGGTGGTGGTGAAGCAGCAGGAGGTGGAGGCTGTGAACAGAGTGAAGAAGTTGCTGATGATGTCTTCGAGTGGCACTCTTCGTTTGCACGCTTTGAGGATGATCAGAAGGGAACTGGGTCTCCCTGAGGATTTCAGAGACTCCATTCTTGGGAAATTCAGTGGGGATTTTAAATTGGTTGGTTTGGAGGTTGTGGAATTGGTTGATTGGGATGTAGAATTGGGATTGGCTGAGGTTGAGAAATGGAGGGAGAGAGAGTACACAGAGAAGTGGTTGAGTGAGTTTGAGACCAAGTTTGCATTTCCCATTAGTTTCCCTACTGGGTTTAAGATTGAGAGAGGGTTTAGAGAGAGGTTGAAGAATTGGCAGAGGCTTTCATACACTAAGCCTTATGAGCGGAAGGAGGTTGTTAGGGTGAGGACATGTGGAGGGATTGAGCGGTATGAGAAGAGAGCTGTGGCTGTTCTTCATGAACTATTGAGCTTGACTGTGGAGAAAATGGTTGAGGTTGATCAACTGGCTCATTTTCGGAGAGACTTAGGTATTGAAGTTAATGTGCGTGAATTGCTGCTTAGGCACCCTGGTATATTTTACATATCAACCAAGGGGAAGACTCTGACTGTTTTTCTTAGGGAAGCATATGCGAAAGGGGGTTTGATTGAGCCGAATCCCGTGTATGAGGCGCGTAGGAATATGCTGGATCTTGTATTGTTAGGGTGTAGAAAAACCAGAAAATTGTTGGCTTGTGATGAGGCTAACGAAGAGAGTAATGGTGTAGTCTGTGAAGTGAATGAGAAAGGTGAAAGACAAGGAGATTGGTTGATTCCTTTTTTGGAGAATTGTGAGGAGAGTAGATCCGCTTGA 1248 0.4744 MNLLNSPRHRFLSSPFTLFTQRRWKKPTVSAQTRLEDRVRDPHFDKLMAHLKRLYLVLEIHHLMSTRKRAPFVSLALMSRWRNILGLNVPVGHFLHKYPHVFHVFVHSLRRNRCCRVTKKMKELILLEGVVVKQQEVEAVNRVKKLLMMSSSGTLRLHALRMIRRELGLPEDFRDSILGKFSGDFKLVGLEVVELVDWDVELGLAEVEKWREREYTEKWLSEFETKFAFPISFPTGFKIERGFRERLKNWQRLSYTKPYERKEVVRVRTCGGIERYEKRAVAVLHELLSLTVEKMVEVDQLAHFRRDLGIEVNVRELLLRHPGIFYISTKGKTLTVFLREAYAKGGLIEPNPVYEARRNMLDLVLLGCRKTRKLLACDEANEESNGVVCEVNEKGERQGDWLIPFLENCEESRSA* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00309 415 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 18 385 IPR045040 GO:0003723
Lapu1g00309 415 Pfam Plant organelle RNA recognition domain 39 368 IPR021099 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00309 Lapu-Chr1 12033520 12034788 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00309 - - gmx:100789857 687.182