Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00274 ATGGTTATGCATAAGATTCTGCAAAGGGGTCGTCCATTCCTCGATCCTCCTCTGAAACTTGTTACTGCCTTCTCACCTTCTTCGGCTTCTCACACATTTCCCTCTTGTGGGGATGAACCCCTTCATGTTCGGGAAATCACAAACACAAGAGAATTTAGGAATGAATTTGACAAATACCATATAAAAGGTTTATCTCAATGCCTCAACTGGACTTCAAGACATTACTGTAGTCATGCTTCATGCTATGTGGTAAATCGTCATTTTTCATCCGATCGCAATGATATATGCACAAAGGAGTTCTCAAGTAAGCTACTTAAAACTATTCCATACTATGTAAAGATAGTGGAGGTTGGTGCAAGGGATGGATTGCAAAATGAGAAGGCTGTTATTCCTACTAATGTAAAAGTTGAGTTAATACAGCTACTGGTTTCTTCTGGGTTGTCTGTTGTTGAGGCAACAAGTTTTGTCTCACCAAAATGGGTTCCCCAGTTGGCAGATGCAAAGGATGTGTTGGCAACAATTCGGAATGTTGAAGGTACTAGGTTTCCTGTCTTGACTCCAAACATTAAAGGTTTTGAGGCAGCTGTTGCTGCTGGAGCTAAGGAAGTGGCTGTTTTTCCTGCAGCTTCTGAATCATTCTCAAAAGCAAATTTAAATTGTGGCATTGAAGATAATCTTGCTCGTTGCCGCGATATTGCTTCAGCTGCTGGAAGCCTCTCAATGCCTGTTCGTGGATATATATCATGTGTTGTGGGATGTCCTCTGGAAGGAAATATTGCCCCAGCGAAAGTAGCATATGTGGCAAAATCACTGTATGAAATGGGTTGCTCAGAGATTTCTCTGGGTGATACAATTGGTGTTGGCACACCTGGTACTGTCATTCCGATGCTTGAAGCTGTTCTTGACGTTGTTCCAATCGACATGCTTGCTGTCCATTTTCACGACACTTATGGTCAGGCACTTTCAAATATTTTAATTTCACTTCAGATGGGTATCAGCACAGTAGATTCATCTGTTGCTGGTCTTGGAGGTTGTCCATATGCCAAGGGTGCAACTGGGAATGTAGCCACTGAGGATGTCGTTTACATGCTGAATGGACTTGGAGTGAAAACAAATGTGGACCTTGGAAAGCTTATGCTGGCTGGGGATTTCATTTGCAAGCATTTAGGACGTGCATCTGGTTCCAAAGCAGCTACTGCTTTGAGTAAAATTACTAGTCATGCCTCCAAACTATGA 1236 0.4239 MVMHKILQRGRPFLDPPLKLVTAFSPSSASHTFPSCGDEPLHVREITNTREFRNEFDKYHIKGLSQCLNWTSRHYCSHASCYVVNRHFSSDRNDICTKEFSSKLLKTIPYYVKIVEVGARDGLQNEKAVIPTNVKVELIQLLVSSGLSVVEATSFVSPKWVPQLADAKDVLATIRNVEGTRFPVLTPNIKGFEAAVAAGAKEVAVFPAASESFSKANLNCGIEDNLARCRDIASAAGSLSMPVRGYISCVVGCPLEGNIAPAKVAYVAKSLYEMGCSEISLGDTIGVGTPGTVIPMLEAVLDVVPIDMLAVHFHDTYGQALSNILISLQMGISTVDSSVAGLGGCPYAKGATGNVATEDVVYMLNGLGVKTNVDLGKLMLAGDFICKHLGRASGSKAATALSKITSHASKL* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00274 411 SUPERFAMILY Aldolase 108 401 - -
Lapu1g00274 411 PANTHER HYDROXYMETHYLGLUTARYL-COA LYASE 92 404 IPR043594 GO:0016833
Lapu1g00274 411 CDD DRE_TIM_HMGL 114 387 - -
Lapu1g00274 411 Gene3D Aldolase class I 106 404 IPR013785 -
Lapu1g00274 411 ProSitePatterns Hydroxymethylglutaryl-coenzyme A lyase active site. 338 347 IPR000138 GO:0004419
Lapu1g00274 411 Pfam HMGL-like 112 384 IPR000891 GO:0003824
Lapu1g00274 411 FunFam Hydroxymethylglutaryl-CoA lyase, mitochondrial 106 404 - -
Lapu1g00274 411 ProSiteProfiles Pyruvate carboxyltransferase domain. 112 379 IPR000891 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00274 Lapu-Chr1 10855681 10862189 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00274 K01640 - gmx:100801507 712.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00274 1 10855681 10862189 Lapu1g00274 1 10855681 10862189 ECH