Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00265 ATGAACGGAGGCCCATCTGGTTTCACAAATGCTCCCGTCACAAGGCTTTTCATCGTCGCTTCGGCGCTTTTCACAATCTTCTTTGGGATCCAGGGCCGTTTCGGCACTCTGGGGCTGTCTTATCAGGATATTTTTGGAAAACTTCGCCTTTGGAAGTTGATCATGTCCATATTTTCCTTCTCATCAACACCAGAGTTGATGTTTGGTCTGTATCTGCTATATTATTTCAGGGTCTTTGAAAGACAGATAGGCTCCAATAAATACTCTGTCTTTATTGTGTTCTCAATATTAACTTCACTACTGCTTGAGGTCCTTGCTGTATCATTTTTTAAAGATCCTACAGCAAACCTAGTCACTCCTGGACCATACGGCCTTATATTTGCTTCATTTGTACCCTTTTTCTTTGACATTCCGGTTTCAACACGGTTTCGTGTGTTTAGCTTCTTCTTCTCAGACAAGTCATTCATATATCTTGCTGGTCTTCAGCTTCTTCTGTCATCATGGAAAAGGTCCATCTTACCAGGGATGTGTGGCATCCTTGCTGGTTCCTTGTACCGATTGAATGTCTTTTACATCCGCAAAGCAAAGTTCCCAGAGTTAATCTCGTCATTCTTCTCACGAATTACATTGCCATCTATGGGAAGTCCACGTTCGACATCATCATCATCATCAACAAGGCATAGTGTTGGGAATTTACCTTCCCATCCAGCTCGTCAAATGGAGAGAAACTACCCTGCGCCAATGCAATCTGCGGTAGAACCATCAGAGGACTCTATAACTACGCTTGTCTCGATGGGCTTTGACAGGAATTCTGCCAGACAAGCCCTAGTGCAGGCCAGAAATGATGTCAATGTGGCCACCAACATCCTATTGGAGGCACAGTCTCACTAA 891 0.4388 MNGGPSGFTNAPVTRLFIVASALFTIFFGIQGRFGTLGLSYQDIFGKLRLWKLIMSIFSFSSTPELMFGLYLLYYFRVFERQIGSNKYSVFIVFSILTSLLLEVLAVSFFKDPTANLVTPGPYGLIFASFVPFFFDIPVSTRFRVFSFFFSDKSFIYLAGLQLLLSSWKRSILPGMCGILAGSLYRLNVFYIRKAKFPELISSFFSRITLPSMGSPRSTSSSSSTRHSVGNLPSHPARQMERNYPAPMQSAVEPSEDSITTLVSMGFDRNSARQALVQARNDVNVATNILLEAQSH* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00265 296 Pfam Rhomboid family 49 189 IPR022764 GO:0004252|GO:0016020
Lapu1g00265 296 PANTHER RHOMBOID-RELATED PROTEIN 3 238 - -
Lapu1g00265 296 SMART uba_6 255 292 IPR015940 -
Lapu1g00265 296 SUPERFAMILY Rhomboid-like 11 187 IPR035952 -
Lapu1g00265 296 MobiDBLite consensus disorder prediction 212 232 - -
Lapu1g00265 296 Pfam UBA/TS-N domain 255 290 IPR015940 -
Lapu1g00265 296 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 253 293 IPR015940 -
Lapu1g00265 296 Gene3D - 217 295 - -
Lapu1g00265 296 MobiDBLite consensus disorder prediction 212 241 - -
Lapu1g00265 296 SUPERFAMILY UBA-like 248 293 IPR009060 GO:0005515
Lapu1g00265 296 Gene3D - 9 188 IPR035952 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00265 K25216 - gmx:100805217 506.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00265 1 10471346 10478027 Lapu1g00265 1 10471346 10478027 ECH